File scilab-hdf5-1_10-compat.patch of Package scilab

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File scilab-hdf5-1_10-compat.patch of Package scilab (Revision 553114b2b7901a91bc4405fbf264ae34)

Currently displaying revision 553114b2b7901a91bc4405fbf264ae34 , Show latest

Index: scilab-6.0.0/modules/hdf5/src/c/h5_readDataFromFile.c
===================================================================
--- scilab-6.0.0.orig/modules/hdf5/src/c/h5_readDataFromFile.c
+++ scilab-6.0.0/modules/hdf5/src/c/h5_readDataFromFile.c
@@ -742,7 +742,11 @@ int readCommonPolyMatrix(int _iDatasetId
         /*
          * Open the referenced object, get its name and type.
          */
-        obj = H5Rdereference(_iDatasetId, H5R_OBJECT, &pData[i]);
+        obj = H5Rdereference(_iDatasetId,
+    #if H5_VERSION_GE(1,10,0)
+                             H5P_DATASET_ACCESS_DEFAULT,
+    #endif
+                             H5R_OBJECT, &pData[i]);
         if (_iComplex)
         {
             status = readComplexPoly(obj, &_piNbCoef[i], &_pdblReal[i], &_pdblImg[i]);
@@ -976,7 +980,11 @@ int readCommonSparseComplexMatrix(int _i
     }
 
     //read Row data
-    obj = H5Rdereference(_iDatasetId, H5R_OBJECT, &pRef[0]);
+    obj = H5Rdereference(_iDatasetId,
+#if H5_VERSION_GE(1,10,0)
+                         H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                         H5R_OBJECT, &pRef[0]);
     status = readInteger32Matrix(obj, _piNbItemRow);
     if (status < 0)
     {
@@ -984,7 +992,11 @@ int readCommonSparseComplexMatrix(int _i
     }
 
     //read cols data
-    obj = H5Rdereference(_iDatasetId, H5R_OBJECT, &pRef[1]);
+    obj = H5Rdereference(_iDatasetId,
+#if H5_VERSION_GE(1,10,0)
+                         H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                         H5R_OBJECT, &pRef[1]);
     status = readInteger32Matrix(obj, _piColPos);
     if (status < 0)
     {
@@ -992,7 +1004,11 @@ int readCommonSparseComplexMatrix(int _i
     }
 
     //read sparse data
-    obj = H5Rdereference(_iDatasetId, H5R_OBJECT, &pRef[2]);
+    obj = H5Rdereference(_iDatasetId,
+#if H5_VERSION_GE(1,10,0)
+                         H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                         H5R_OBJECT, &pRef[2]);
 
     if (_iComplex)
     {
@@ -1043,7 +1059,11 @@ int readBooleanSparseMatrix(int _iDatase
     }
 
     //read Row data
-    obj = H5Rdereference(_iDatasetId, H5R_OBJECT, &pRef[0]);
+    obj = H5Rdereference(_iDatasetId,
+#if H5_VERSION_GE(1,10,0)
+                         H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                         H5R_OBJECT, &pRef[0]);
     status = readInteger32Matrix(obj, _piNbItemRow);
     if (status < 0)
     {
@@ -1053,7 +1073,11 @@ int readBooleanSparseMatrix(int _iDatase
     if (_iNbItem != 0)
     {
         //read cols data
-        obj = H5Rdereference(_iDatasetId, H5R_OBJECT, &pRef[1]);
+        obj = H5Rdereference(_iDatasetId,
+    #if H5_VERSION_GE(1,10,0)
+                             H5P_DATASET_ACCESS_DEFAULT,
+    #endif
+                             H5R_OBJECT, &pRef[1]);
         status = readInteger32Matrix(obj, _piColPos);
         if (status < 0)
         {
@@ -1154,7 +1178,11 @@ int getListItemDataset(int _iDatasetId,
 {
     hobj_ref_t poRef = ((hobj_ref_t *) _piItemRef)[_iItemPos];
 
-    *_piItemDataset = H5Rdereference(_iDatasetId, H5R_OBJECT, &poRef);
+    *_piItemDataset = H5Rdereference(_iDatasetId,
+#if H5_VERSION_GE(1,10,0)
+                                     H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                                     H5R_OBJECT, &poRef);
 
     if (*_piItemDataset == 0)
     {
Index: scilab-6.0.0/modules/hdf5/src/c/h5_readDataFromFile_v1.c
===================================================================
--- scilab-6.0.0.orig/modules/hdf5/src/c/h5_readDataFromFile_v1.c
+++ scilab-6.0.0/modules/hdf5/src/c/h5_readDataFromFile_v1.c
@@ -474,7 +474,11 @@ int readDoubleMatrix_v1(int _iDatasetId,
         }
 
         //Open the referenced object, get its name and type.
-        obj = H5Rdereference(_iDatasetId, H5R_OBJECT, &Ref);
+        obj = H5Rdereference(_iDatasetId,
+    #if H5_VERSION_GE(1,10,0)
+                             H5P_DATASET_ACCESS_DEFAULT,
+    #endif
+                             H5R_OBJECT, &Ref);
         readDouble_v1(obj, _iRows, _iCols, _pdblData);
     }
 
@@ -501,14 +505,22 @@ int readDoubleComplexMatrix_v1(int _iDat
     }
 
     //Open the referenced object, get its name and type.
-    obj = H5Rdereference(_iDatasetId, H5R_OBJECT, &pRef[0]);
+    obj = H5Rdereference(_iDatasetId,
+#if H5_VERSION_GE(1,10,0)
+                         H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                         H5R_OBJECT, &pRef[0]);
     status = readDouble_v1(obj, _iRows, _iCols, _pdblReal);
     if (status < 0)
     {
         return -1;
     }
 
-    obj = H5Rdereference(_iDatasetId, H5R_OBJECT, &pRef[1]);
+    obj = H5Rdereference(_iDatasetId,
+#if H5_VERSION_GE(1,10,0)
+                         H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                         H5R_OBJECT, &pRef[1]);
     status = readDouble_v1(obj, _iRows, _iCols, _pdblImg);
     if (status < 0)
     {
@@ -834,7 +846,11 @@ int readCommonPolyMatrix_v1(int _iDatase
         /*
         * Open the referenced object, get its name and type.
         */
-        obj = H5Rdereference(_iDatasetId, H5R_OBJECT, &pData[i]);
+        obj = H5Rdereference(_iDatasetId,
+    #if H5_VERSION_GE(1,10,0)
+                             H5P_DATASET_ACCESS_DEFAULT,
+    #endif
+                             H5R_OBJECT, &pData[i]);
         if (_iComplex)
         {
             status = readComplexPoly_v1(obj, &_piNbCoef[i], &_pdblReal[i], &_pdblImg[i]);
@@ -1069,7 +1085,11 @@ int readCommonSparseComplexMatrix_v1(int
     }
 
     //read Row data
-    obj = H5Rdereference(_iDatasetId, H5R_OBJECT, &pRef[0]);
+    obj = H5Rdereference(_iDatasetId,
+#if H5_VERSION_GE(1,10,0)
+                         H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                         H5R_OBJECT, &pRef[0]);
     status = readInteger32Matrix_v1(obj, 1, _iRows, _piNbItemRow);
     if (status < 0)
     {
@@ -1077,7 +1097,11 @@ int readCommonSparseComplexMatrix_v1(int
     }
 
     //read cols data
-    obj = H5Rdereference(_iDatasetId, H5R_OBJECT, &pRef[1]);
+    obj = H5Rdereference(_iDatasetId,
+#if H5_VERSION_GE(1,10,0)
+                         H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                         H5R_OBJECT, &pRef[1]);
     status = readInteger32Matrix_v1(obj, 1, _iNbItem, _piColPos);
     if (status < 0)
     {
@@ -1085,7 +1109,11 @@ int readCommonSparseComplexMatrix_v1(int
     }
 
     //read sparse data
-    obj = H5Rdereference(_iDatasetId, H5R_OBJECT, &pRef[2]);
+    obj = H5Rdereference(_iDatasetId,
+#if H5_VERSION_GE(1,10,0)
+                         H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                         H5R_OBJECT, &pRef[2]);
 
     if (_iComplex)
     {
@@ -1131,7 +1159,11 @@ int readBooleanSparseMatrix_v1(int _iDat
     }
 
     //read Row data
-    obj = H5Rdereference(_iDatasetId, H5R_OBJECT, &pRef[0]);
+    obj = H5Rdereference(_iDatasetId,
+#if H5_VERSION_GE(1,10,0)
+                         H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                         H5R_OBJECT, &pRef[0]);
     status = readInteger32Matrix_v1(obj, 1, _iRows, _piNbItemRow);
     if (status < 0)
     {
@@ -1139,7 +1171,11 @@ int readBooleanSparseMatrix_v1(int _iDat
     }
 
     //read cols data
-    obj = H5Rdereference(_iDatasetId, H5R_OBJECT, &pRef[1]);
+    obj = H5Rdereference(_iDatasetId,
+#if H5_VERSION_GE(1,10,0)
+                         H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                         H5R_OBJECT, &pRef[1]);
     status = readInteger32Matrix_v1(obj, 1, _iNbItem, _piColPos);
     if (status < 0)
     {
@@ -1234,7 +1270,11 @@ int getListItemDataset_v1(int _iDatasetI
 {
     hobj_ref_t poRef = ((hobj_ref_t *) _piItemRef)[_iItemPos];
 
-    *_piItemDataset = H5Rdereference(_iDatasetId, H5R_OBJECT, &poRef);
+    *_piItemDataset = H5Rdereference(_iDatasetId,
+#if H5_VERSION_GE(1,10,0)
+                                     H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                                     H5R_OBJECT, &poRef);
 
     if (*_piItemDataset == 0)
     {
Index: scilab-6.0.0/modules/hdf5/src/cpp/H5ReferenceData.cpp
===================================================================
--- scilab-6.0.0.orig/modules/hdf5/src/cpp/H5ReferenceData.cpp
+++ scilab-6.0.0/modules/hdf5/src/cpp/H5ReferenceData.cpp
@@ -42,7 +42,11 @@ const char ** H5ReferenceData::getRefere
     for (int i = 0; i < totalSize; i++)
     {
         void * ref = &(((void **)cdata)[i]);
-        hid_t obj = H5Rdereference(file, datasetReference ? H5R_DATASET_REGION : H5R_OBJECT, ref);
+        hid_t obj = H5Rdereference(file,
+    #if H5_VERSION_GE(1,10,0)
+                                   H5P_DATASET_ACCESS_DEFAULT,
+    #endif
+                                   datasetReference ? H5R_DATASET_REGION : H5R_OBJECT, ref);
         H5O_info_t info;
         H5Oget_info(obj, &info);
         H5Oclose(obj);
@@ -84,7 +88,11 @@ H5Object & H5ReferenceData::getData(cons
 
     file = getFile().getH5Id();
     ref = &(((void **)cdata)[0]);
-    obj = H5Rdereference(file, datasetReference ? H5R_DATASET_REGION : H5R_OBJECT, ref);
+    obj = H5Rdereference(file,
+#if H5_VERSION_GE(1,10,0)
+                         H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                         datasetReference ? H5R_DATASET_REGION : H5R_OBJECT, ref);
     if (obj < 0)
     {
         throw H5Exception(__LINE__, __FILE__, _("Cannot open object at the given position."));
@@ -126,7 +134,11 @@ H5Object ** H5ReferenceData::getReferenc
     for (int i = 0; i < totalSize; i++)
     {
         void * ref = &(((void **)cdata)[i]);
-        hid_t obj = H5Rdereference(file, datasetReference ? H5R_DATASET_REGION : H5R_OBJECT, ref);
+        hid_t obj = H5Rdereference(file,
+    #if H5_VERSION_GE(1,10,0)
+                                   H5P_DATASET_ACCESS_DEFAULT,
+    #endif
+                                   datasetReference ? H5R_DATASET_REGION : H5R_OBJECT, ref);
         objs[i] = &H5Object::getObject(getParent(), obj);
     }
 
@@ -181,7 +193,11 @@ void H5ReferenceData::printData(std::ost
     char * cdata = static_cast<char *>(data) + offset + pos * (stride ? stride : dataSize);
     void ** ref = &(((void **)cdata)[0]);
     hid_t file = getFile().getH5Id();
-    hid_t obj = H5Rdereference(file, datasetReference ? H5R_DATASET_REGION : H5R_OBJECT, ref);
+    hid_t obj = H5Rdereference(file,
+#if H5_VERSION_GE(1,10,0)
+                               H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                               datasetReference ? H5R_DATASET_REGION : H5R_OBJECT, ref);
     if (obj < 0)
     {
         os << "NULL";
Index: scilab-6.0.0/modules/hdf5/sci_gateway/cpp/sci_hdf5_load_v3.cpp
===================================================================
--- scilab-6.0.0.orig/modules/hdf5/sci_gateway/cpp/sci_hdf5_load_v3.cpp
+++ scilab-6.0.0/modules/hdf5/sci_gateway/cpp/sci_hdf5_load_v3.cpp
@@ -648,7 +648,11 @@ static types::InternalType* import_struc
         //import field
         for (int j = 0; j < refcount; ++j)
         {
-            int data = H5Rdereference(refs, H5R_OBJECT, &vrefs[j]);
+            int data = H5Rdereference(refs,
+#if H5_VERSION_GE(1,10,0)
+                                      H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                                      H5R_OBJECT, &vrefs[j]);
             if (data < 0)
             {
                 freeStringMatrix(dfield, fields.data());
Index: scilab-6.0.0/modules/hdf5/sci_gateway/cpp/sci_hdf5_listvar_v3.cpp
===================================================================
--- scilab-6.0.0.orig/modules/hdf5/sci_gateway/cpp/sci_hdf5_listvar_v3.cpp
+++ scilab-6.0.0/modules/hdf5/sci_gateway/cpp/sci_hdf5_listvar_v3.cpp
@@ -735,7 +735,11 @@ static bool read_struct(int dataset, Var
             //import field
             for (int j = 0; j < refcount; ++j)
             {
-                int data = H5Rdereference(refs, H5R_OBJECT, &vrefs[j]);
+                int data = H5Rdereference(refs,
+#if H5_VERSION_GE(1,10,0)
+                                          H5P_DATASET_ACCESS_DEFAULT,
+#endif
+                                          H5R_OBJECT, &vrefs[j]);
                 if (data < 0)
                 {
                     return false;

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File scilab-hdf5-1_10-compat.patch of Package scilab (Revision 553114b2b7901a91bc4405fbf264ae34)

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