Revisions of python-astropy

Dominique Leuenberger's avatar Dominique Leuenberger (dimstar_suse) accepted request 1038656 from Factory Maintainer's avatar Factory Maintainer (factory-maintainer) (revision 37)
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Dominique Leuenberger's avatar Dominique Leuenberger (dimstar_suse) accepted request 1030595 from Benjamin Greiner's avatar Benjamin Greiner (bnavigator) (revision 36)
- Update to 5.1.1
  # API Changes
  ## astropy.wcs
  * The pixel argument to
    astropy.visualization.wcsaxes.ticklabels.TickLabels.add no
    longer does anything, is deprecated, and will be removed in a
    future astropy version. It has been replaced by a new required
    data argument, which should be used to specify the data
    coordinates of the tick label being added.
  * This changes has been made because it is (in general) not
    possible to correctly calculate pixel coordinates before
    Matplotlib is drawing a figure. [#12630]
  # Bug Fixes
  ## astropy.coordinates
  * Fixed a bug that prevented SkyOffsetFrame instances to be
    pickled by adding a custom __reduce__ method to the class (see
    issue #9249). [#13305]
  * Fixed the check for invalid Latitude values for float32 values.
    Latitude now accepts the float32 value of pi/2, which was
    rejected before because a comparison was made using the
    slightly smaller float64 representation. See issue #13708.
    [#13745]
  ## astropy.io.ascii
  * Fixed confusing chained exception messages of read() function
    when it fails. [#13170]
  * When writing out a :class:`~astropy.table.Table` to HTML
    format, the formats keyword argument to the
    :meth:`~astropy.table.Table.write` method will now be applied.
    [#13453]
  ## astropy.io.fits
  * heapsize is now checked for VLA tables. An error is thrown
    whether P format is used but the heap size is bigger than what
    can be indexed with a 32 bit signed int. [#13429]
  * Fix parsing of ascii TFORM when precision is missing. [#13520]
  * A compressed image HDU created from the header of a PRIMARY
    HDU, now correctly updates 'XTENSION' and 'SIMPLE' keywords.
    [#13557]
  * Empty variable-length arrays are now properly handled when
    pathological combinations of heapoffset and heapsize are
    encountered. [#13621]
  * PCOUNT and GCOUNT keywords are now removed from an uncompressed
    Primary header, for compliancy with fitsverify behavior.
    [#13753]
  ## astropy.modeling
  * Bugfix for using MagUnit units on model parameters. [#13158]
  * Fix bug in using non-linear fitters to fit 0-degree polynomials
    using weights. [#13628]
  ## astropy.table
  * Fix a problem where accessing one field of a structured column
    returned a Column with the same info as the original column.
    This resulted in unintuitive behavior in general and an
    exception if the format for the column was set. [#13269]
  * Tables with columns with structured data can now be properly
    stacked and joined. [#13306]
  * Update jQuery to 3.6.0, to pick up security fixes. [#13438]
  * Fix a Python 3.11 compatibility issue. Ensure that when
    removing a table column that the pprint_include_names or
    pprint_exclude_names attributes get updated correctly. [#13639]
  * When using add_columns with same indexes in indexes option or
    without specifying the option, the order of the new columns
    will now be kept. [#13783]
  * Fix a bug when printing or getting the representation of a
    multidimensional table column that has a zero dimension.
    [#13838]
  * Ensure that mixin columns and their info are not shared between
    tables even when their underlying data is shared with
    copy=False. [#13842]
  ## astropy.time
  * Fix Time.insert() on times which have their out_subfmt set.
    [#12732]
  * Prevent Time() from being initialized with an invalid precision
    leading to incorrect results when representing the time as a
    string. [#13068]
  * Fix a bug in Time where a date string like "2022-08-01.123" was
    being parsed as an ISO-format time "2022-08-01 00:00:00.123".
    The fractional part at the end of the string was being taken as
    seconds. Now this raises an exception because the string is not
    in ISO format. [#13731]
  ## astropy.units
  * Significantly improved the performance of parsing composite
    units with the FITS format, by ensuring the detailed_exception
    argument is properly passed on and thus used. [#12699]
  * Ensure that np.concatenate on quantities can take a dtype
    argument (added in numpy 1.20). [#13323]
  * Ensure that the units of any initial argument to reductions
    such as np.add.reduce (which underlies np.sum) are properly
    taken into account. [#13340]
  ## astropy.utils
  * Ensure that np.concatenate on masked data can take a dtype
    argument (added in numpy 1.20). [#13323]
  * Fix error when suppressing download progress bar while using
    non-default sys.stdout stream. [#13352]
  * Ensure str and repr work properly for Masked versions of
    structured subarrays. [#13404]
  * If an attribute is created using deprecated_attribute() with
    the alternative argument then getting or setting the value of
    the deprecated attribute now accesses its replacement. [#13824]
  ## astropy.visualization
  * Fixed calling .tight_layout() on a WCSAxes. [#12418]
  ## astropy.wcs
  * WCS.pixel_to_world now creates an EarthLocation object using
    MJD-AVG if present before falling back to the old behaviour of
    using MJD-OBS. [#12598]
  * The locations of WCSAxes ticks and tick-labels are now
    correctly calculated when the DPI of a figure changes between a
    WCSAxes being created and the figure being drawn, or when a
    rasterized artist is added to the WCSAxes. [#12630]
  * Fix a bug where SlicedLowLevelWCS.world_to_pixel_values would
    break when the result of the transform is dependent on the
    coordinate of a sliced out pixel. [#13579]
  * Updated bundled WCSLIB version to 7.12. This update includes
    bug fixes to wcssub() in how it handles temporal axes with -TAB
    and fixes handling of status returns from linp2x() and linx2p()
    relating to distortion functions, in particular affecting TPV
    distortions - see #13509. For a full list of changes - see
    http://www.atnf.csiro.au/people/mcalabre/WCS/CHANGES or
    astropy/cextern/wcslib/CHANGES. [#13635]
  * Fixed WCS validation not working properly if HDUList is needed
    for multi-extension FITS file. [#13668]
Dominique Leuenberger's avatar Dominique Leuenberger (dimstar_suse) accepted request 980183 from Benjamin Greiner's avatar Benjamin Greiner (bnavigator) (revision 34)
- Skip two test categories segfaulting: gh#astropy/astropy#13286
- Update to 5.1
  * Astropy 5.1 is a major release that adds significant new
    functionality since the 5.0 LTS release.
  * In particular, this release includes:
    - Updates to cosmology
    - doppler_redshift() equivalency
    - Specifying data types when reading ASCII tables
    - Structured Columns
    - New model fitters have been added
    - Allow time conversions without predictive Earth rotation data
      (IERS-A)
    - Uncertainty classes can be transformed into each other
    - Schechter1D Model
  * In addition to these major changes, Astropy v5.1 includes a
    large number of smaller improvements and bug fixes, which are
    described in the Full Changelog.
Dominique Leuenberger's avatar Dominique Leuenberger (dimstar_suse) accepted request 972390 from Benjamin Greiner's avatar Benjamin Greiner (bnavigator) (revision 33)
- Enable tests requiring Pytest 7
Dominique Leuenberger's avatar Dominique Leuenberger (dimstar_suse) accepted request 942986 from Benjamin Greiner's avatar Benjamin Greiner (bnavigator) (revision 29)
- Skip flaky test_color_print3
- Update to version 5.0
  * https://docs.astropy.org/en/stable/whatsnew/5.0.html
  * Astropy 5.0 is a major release that adds significant new
    functionality since the 4.3.x series of releases. In addition,
    it is a long-term support release (LTS) which will be supported
    with bug fixes for two years. In particular, this release
    includes:
  * Support for reading, writing, and converting Cosmology
  * Cosmology units module
  * New Models
  * Added support for dask arrays in tables
  * Added support for registering array-like objects as mixin
    columns
  * Support for reading and writing tables to Parquet format
  * Support for reading and writing tables to MRT format
  * Support for masked quantity columns, including masked FITS
    columns with units
  * Converting SkyCoord to QTable
  * New Unified I/O architecture
  * In addition to these major changes, Astropy v5.0 includes a
    large number of smaller improvements and bug fixes, which
    are described in the Full Changelog.
    https://docs.astropy.org/en/stable/changelog.html#changelog
- Drop patches fixed upstream
  * astropy-pr12006-cfitsio4.patch
  * astropy-pr12159-py310.patch
Dominique Leuenberger's avatar Dominique Leuenberger (dimstar_suse) accepted request 928036 from Benjamin Greiner's avatar Benjamin Greiner (bnavigator) (revision 27)
- Skip test_no_numpy_warnings[contours] due to wrong MPL version
  check -- gh#astropy/astropy#12050
Dominique Leuenberger's avatar Dominique Leuenberger (dimstar_suse) accepted request 916131 from Factory Maintainer's avatar Factory Maintainer (factory-maintainer) (revision 26)
Automatic submission by obs-autosubmit
Richard Brown's avatar Richard Brown (RBrownSUSE) accepted request 912890 from Benjamin Greiner's avatar Benjamin Greiner (bnavigator) (revision 25)
- Update to version 4.3.1
  Bug Fixes
  astropy.io.fits
  * In fits.io.getdata do not fall back to first non-primary
    extension when user explicitly specifies an extension. [#11860]
  * Ensure multidimensional masked columns round-trip properly to
    FITS. [#11911]
  * Ensure masked times round-trip to FITS, even if
    multi-dimensional. [#11913]
  * Raise ValueError if an np.float32 NaN/Inf value is assigned to
    a header keyword. [#11922]
  astropy.modeling
  * Fixed bug in fix_inputs handling of bounding boxes. [#11908]
  astropy.table
  * Fix an error when converting to pandas any Table subclass that
    automatically adds a table index when the table is created. An
    example is a binned TimeSeries table. [#12018]
  astropy.units
  * Ensure that unpickling quantities and units in new sessions
    does not change hashes and thus cause problems with (de)
    composition such as getting different answers from the .si
    attribute. [#11879]
  * Fixed cannot import name imperial from astropy.units
    namespace. [#11977]
  astropy.utils
  * Ensure any .info on Masked instances is propagated correctly
    when viewing or slicing. As a consequence, MaskedQuantity can
    now be correctly written to, e.g., ECSV format with
    serialize_method='data_mask'. [#11910]
Dominique Leuenberger's avatar Dominique Leuenberger (dimstar_suse) accepted request 910386 from Benjamin Greiner's avatar Benjamin Greiner (bnavigator) (revision 24)
- Add astropy-pr12006-cfitsio4.patch for cfitsio 4
  gh#astropy/astropy#12006
- Revert the use of bundled cfitsio for non x86 architectures.
  Those just had cfitsio earlier in the repositories than x86. (forwarded request 910385 from bnavigator)
Richard Brown's avatar Richard Brown (RBrownSUSE) accepted request 883883 from Benjamin Greiner's avatar Benjamin Greiner (bnavigator) (revision 21)
- Update to version 4.2.1
  astropy.cosmology
  * Fixed an issue where specializations of the comoving distance
    calculation for certain cosmologies could not handle redshift
    arrays. [#10980]
  astropy.io.fits
  * Fix bug where manual fixes to invalid header cards were not
    preserved when saving a FITS file. [#11108]
  astropy.io.votable
  * NumericArray converter now properly broadcasts scalar mask to
    array. [#11157]
  astropy.table
  * Fix bug when initializing a Table subclass that uses
    TableAttribute's. If the data were an instance of the table
    then attributes provided in the table initialization call
    could be ignored. [#11217]
  astropy.time
  * Change epoch of TimeUnixTAI ("unix_tai") from
    1970-01-01T00:00:00 UTC to 1970-01-01T00:00:00 TAI to match
    the intended and documented behaviour. This essentially
    changes the resulting times by 8.000082 seconds, the initial
    offset between TAI and UTC. [#11249]
  astropy.units
  * Fixed a bug with the quantity_input decorator where allowing
    dimensionless inputs for an argument inadvertently disabled
    any checking of compatible units for that argument. [#11283]
  astropy.utils
  * Fix a bug so that np.shape, np.ndim and np.size again work on
    classes that use ShapedLikeNDArray, like representations,
    frames, sky coordinates, and times. [#11133] (forwarded request 883882 from bnavigator)
Dominique Leuenberger's avatar Dominique Leuenberger (dimstar_suse) accepted request 863708 from Benjamin Greiner's avatar Benjamin Greiner (bnavigator) (revision 19)
- Make sure that the python >= 3.7 requirement is checked on
  build time and let rpm do the rest.
- Use bundled libraries on Leap 15.X
Dominique Leuenberger's avatar Dominique Leuenberger (dimstar_suse) accepted request 861783 from Factory Maintainer's avatar Factory Maintainer (factory-maintainer) (revision 18)
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