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openSUSE:Backports:SLE-15-SP4:RebuildFactoryCandidates
python-tifffile
python-tifffile.spec
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File python-tifffile.spec of Package python-tifffile
# # spec file for package python-tifffile # # Copyright (c) 2024 SUSE LLC # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed # upon. The license for this file, and modifications and additions to the # file, is the same license as for the pristine package itself (unless the # license for the pristine package is not an Open Source License, in which # case the license is the MIT License). An "Open Source License" is a # license that conforms to the Open Source Definition (Version 1.9) # published by the Open Source Initiative. # Please submit bugfixes or comments via https://bugs.opensuse.org/ # %global flavor @BUILD_FLAVOR@%{nil} %if "%{flavor}" == "test" %define psuffix -test %bcond_without test %else %define psuffix %{nil} %bcond_with test %endif Name: python-tifffile%{psuffix} Version: 2024.6.18 Release: 0 Summary: Read and write TIFF files License: BSD-2-Clause URL: https://github.com/cgohlke/tifffile/ Source: https://github.com/cgohlke/tifffile/archive/v%{version}.tar.gz#/tifffile-%{version}.tar.gz BuildRequires: %{python_module base >= 3.9} BuildRequires: %{python_module numpy >= 1.21} BuildRequires: %{python_module pip} BuildRequires: %{python_module setuptools} BuildRequires: %{python_module wheel} BuildRequires: fdupes BuildRequires: python-rpm-macros Requires: python-numpy Requires(post): update-alternatives Requires(postun): update-alternatives Recommends: python-fsspec Recommends: python-imagecodecs >= 2023.3.16 Recommends: python-lxml Recommends: python-matplotlib >= 3.3 Recommends: python-zarr # SECTION test %if %{with test} BuildRequires: %{python_module cmapfile} BuildRequires: %{python_module czifile} BuildRequires: %{python_module dask} BuildRequires: %{python_module defusedxml} BuildRequires: %{python_module fsspec} BuildRequires: %{python_module imagecodecs >= 2023.3.16} BuildRequires: %{python_module lfdfiles} BuildRequires: %{python_module lxml} BuildRequires: %{python_module matplotlib} BuildRequires: %{python_module ndtiff} BuildRequires: %{python_module oiffile} BuildRequires: %{python_module pytest-xdist} BuildRequires: %{python_module pytest} BuildRequires: %{python_module roifile} BuildRequires: %{python_module xarray if %python-base >= 3.10} BuildRequires: %{python_module zarr} %endif # /SECTION BuildArch: noarch %python_subpackages %description Read and write TIFF files. Read image and metadata from many bio-scientific formats such as plain TIFF, BigTIFF, OME-TIFF, STK, LSM, SGI, NIH, ImageJ, MicroManager, MD GEL, and FluoView files. Write numpy arrays to TIFF, BigTIFF, and ImageJ hyperstack compatible files. %prep %setup -q -n tifffile-%{version} # Fix warning wrong-file-end-of-line-encoding sed -i 's/\r//' README.rst sed -i '1{/env python/d}' tifffile/{lsm2bin,tiff2fsspec,tiffcomment}.py %build %pyproject_wheel %install %if !%{with test} %pyproject_install %python_clone -a %{buildroot}%{_bindir}/tifffile %python_clone -a %{buildroot}%{_bindir}/lsm2bin %python_clone -a %{buildroot}%{_bindir}/tiffcomment %python_clone -a %{buildroot}%{_bindir}/tiff2fsspec %python_expand %fdupes %{buildroot}%{$python_sitelib} %prepare_alternative tifffile %prepare_alternative lsm2bin %prepare_alternative tiffcomment %endif %post %python_install_alternative tifffile %python_install_alternative lsm2bin %python_install_alternative tiffcomment %python_install_alternative tiff2fsspec %postun %python_uninstall_alternative tifffile %python_uninstall_alternative lsm2bin %python_uninstall_alternative tiffcomment %python_uninstall_alternative tiff2fsspec %check %if %{with test} # Crashes Out-Of-Memory donttest="test_write_5GB_bigtiff or test_write_imagej_raw" # no lerc support in imagecodecs donttest="$donttest or test_write_compression_lerc" # flaky write errors donttest="$donttest or test_write_extrasamples_planar" donttest="$donttest or test_write_extrasamples_contig_rgb" donttest="$donttest or test_write_compression_args" donttest="$donttest or test_issue_invalid_predictor" %pytest -n auto -k "not ($donttest)" %endif %if !%{with test} %files %{python_files} %doc README.rst %license LICENSE %python_alternative %{_bindir}/tifffile %python_alternative %{_bindir}/lsm2bin %python_alternative %{_bindir}/tiffcomment %python_alternative %{_bindir}/tiff2fsspec %{python_sitelib}/tifffile-%{version}.dist-info/ %{python_sitelib}/tifffile %endif %changelog
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