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File python-iminuit.changes of Package python-iminuit
------------------------------------------------------------------- Wed Nov 13 15:16:48 UTC 2024 - Dirk Müller <dmueller@suse.com> - update to 2.30.1: * Ci: add 3.13 wheels * Fix: root version in docs * Allow to modify slider range in interactive widget * Fix: add readout_format to slider * Show correct ROOT version in documentation * Fix odr issue in type_caster which could result in ub when -flto is enabled * Remove packaging dependency * Restore cython tutorial * Support sum(w) < 0 in binned fits * Set pybind11_findpython on to use findpython cmake mode * Fix version parse * Improve maintainer metadata ------------------------------------------------------------------- Mon Sep 23 19:25:45 UTC 2024 - Ben Greiner <code@bnavigator.de> - Fix numba/numpy resolve blocker in obs: Test in multibuild * -test: no numba, numpy >= 2.1 * -test-numba: numpy < 2.1 for numba 0.60 * Remove entry_points empty file workaround: fixed in toolchain ------------------------------------------------------------------- Fri Aug 2 08:58:44 UTC 2024 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.28.0: * drop support for python-3.8 (gh#scikit-hep/iminuit#1015). * Fix LeastSquares for functions with more than two arguments (gh#scikit-hep/iminuit#1016). * Add name argument to all cost functions (gh#scikit-hep/iminuit#1017). - Bump minimum required python-devel to 3.9. ------------------------------------------------------------------- Fri Mar 15 19:54:51 UTC 2024 - Ben Greiner <code@bnavigator.de> - Skip testing with ipywidgets on python39: no longer supported since ipython 8.19 - Clean dependencies - Drop rpmlintrc ------------------------------------------------------------------- Tue Feb 20 10:43:12 UTC 2024 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.25.2: * update to latest root (gh#scikit-hep/iminuit#970). - Changes from version 2.25.1: * improve docs for make_with_signature (gh#scikit-hep/iminuit#963). * Update benchmark to ROOT-6.30 (gh#scikit-hep/iminuit#967). * fix LeastSquares.visualize for models that accept parameter array (gh#scikit-hep/iminuit#968). - Changes from version 2.25.0: * Some updates to the Ruff config (gh#scikit-hep/iminuit#933). * Add extra config to pytest (gh#scikit-hep/iminuit#932). * Cost gradient support (gh#scikit-hep/iminuit#936). * Warn on errordef override (gh#scikit-hep/iminuit#937). * fix: include debug info on failures (gh#scikit-hep/iminuit#946). * Benchmark update to ROOT 6.30 (gh#scikit-hep/iminuit#951). * Fix use of removed array rules in test (gh#scikit-hep/iminuit#952). * Fix docstring parsing (gh#scikit-hep/iminuit#953). * fix test that requires scipy and raise error on invalid value for use_pdf (gh#scikit-hep/iminuit#962). * Approximate CDF from PDF (gh#scikit-hep/iminuit#950). - Do not disable any tests, fixed upstream. ------------------------------------------------------------------- Thu Sep 7 08:27:08 UTC 2023 - Markéta Machová <mmachova@suse.com> - Update to 2.24.0 * Fix CostSum.visualize bug * Fix _safe_log on systems which use 32 bit floats * Iteration limit in smart sampling to fix behavior for step functions * Clarify meaning of 2d contours in minuit.draw_mnmatrix * Support interval type and check compatibility with pydantic ------------------------------------------------------------------- Fri Jun 30 18:24:19 UTC 2023 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.22.0: * add basic latex display support if unicodeit is installed [gh#scikit-help/iminuit#858]. * replace flake8 with ruff [gh#scikit-help/iminuit#859]. * Integer as variable [gh#scikit-help/iminuit#860]. * experimental mncontour algorithm [gh#scikit-help/iminuit#861]. * improve error message for cost function [gh#scikit-help/iminuit#863]. * Add RooFit tutorial [gh#scikit-help/iminuit#867]. * Use unicodeitplus instead of unicodeit to render LaTeX as unicode [gh#scikit-help/iminuit#868]. * Better ruff settings and adjustments, improvements to README [gh#scikit-help/iminuit#871]. * Update Progressbar [gh#scikit-help/iminuit#872]. * Add hide_modules and deprecated_parameters [gh#scikit-help/iminuit#873]. * Forward kwargs in Minuit.visualize to plotting function [gh#scikit-help/iminuit#874]. * Ignore missing matplotlib when calling Minuit.repr_html() [gh#scikit-help/iminuit#875]. * Rename keyword nbins to bins in UnbinnedCost.visualize [gh#scikit-help/iminuit#876]. * Roofit tutorials [gh#scikit-help/iminuit#877]. * better log-spacing detection [gh#scikit-help/iminuit#878]. * Add LeastSquares.pulls and LeastSquares.prediction [gh#scikit-help/iminuit#880]. * fix-typo-in-basic [gh#scikit-help/iminuit#888]. * Update fcn.hpp [gh#scikit-help/iminuit#889]. * Improve docs [gh#scikit-help/iminuit#890]. * Make covariance fields in display easier to understand [gh#scikit-help/iminuit#891]. * New benchmarks [gh#scikit-help/iminuit#893]. * Add Minuit.fixto [gh#scikit-help/iminuit#894]. * fix: make nograd not use grad at all in automatic diff doc [gh#scikit-help/iminuit#895]. * Use scikit-build-core [gh#scikit-help/iminuit#812]. * Update conclusions after the fix from Jonas [gh#scikit-help/iminuit#899]. * Hide confusing notes in docs: "Not to be initialized by users." [gh#scikit-help/iminuit#906]. - Drop missing-headers.patch: Incorporated upstream. - Add BuildRequires: python-scikit-build-core > 0.3.0. - Add %{name}.rpmlintc to suppress a false positive about a missing python module (only required for python < 3.9). ------------------------------------------------------------------- Tue Jun 20 14:15:27 UTC 2023 - Andreas Schwab <schwab@suse.de> - missing-headers.patch: add missing headers - Use the default compiler - Build with %{optflags} ------------------------------------------------------------------- Mon May 29 14:28:55 UTC 2023 - Dirk Müller <dmueller@suse.com> - renenable build for python311 (numba available) ------------------------------------------------------------------- Thu May 4 15:37:09 UTC 2023 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.21.3: * Better docs for limits from annotated model parameters (gh#scikit-hep/scikit-hep-testdata#853). * Bump pypa/cibuildwheel from 2.12.0 to 2.12.1 (gh#scikit-hep/scikit-hep-testdata#855). * fix template input modification bug in Template class (gh#scikit-hep/scikit-hep-testdata#856). ------------------------------------------------------------------- Fri Mar 24 14:45:33 UTC 2023 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.21.2: * Fix CITATION.CFF. - Changes from version 2.21.1: * Fix string annotations (gh#scikit-hep/iminuit#849). * Specifiy minimum required numpy version (gh#scikit-hep/iminuit#848). - Changes from version 2.21.0: * Fix of matrix_format (gh#scikit-hep/iminuit#843). * Support annotated model parameters (gh#scikit-hep/iminuit#839). * Visualize fit in minuit._repr_html_ (gh#scikit-hep/iminuit#838). - Disable builds for python 3.11 as python311-numba is missing. - Use GCC 12 for openSUSE >= 1550 as GCC 13 (now the default) causes build failures. - Update minimum version for (Build)Requires: python-numpy in keeping with upstream. - New BuildRequires: python-typing_extensions (for tests). ------------------------------------------------------------------- Sat Jan 7 12:22:22 UTC 2023 - Dirk Müller <dmueller@suse.com> - update to v2.18.0: * Bump actions/checkout from 2 to 3 * ci: update to Python 3.11 final release * move tutorials * added visualize function to Minuit * Bump pypa/cibuildwheel from 2.10.2 to 2.11.2 * add more checks for gradients * Add Python 3.11, drop 3.6 ------------------------------------------------------------------- Wed Aug 17 21:43:27 UTC 2022 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.16.0: * Make FixedView act as mask for other views [gh#scikit-hep/iminuit#781]. * Fix typing issues and enable mypy in pre-commit [gh#scikit-hep/iminuit#783]. * Comparison with broadcast [gh#scikit-hep/iminuit#784]. * Fix corner case treatment of linear constraint [gh#scikit-hep/iminuit#785]. * Root update [gh#scikit-hep/iminuit#786]. - Disable 'test_matrix' test in the check section for 32-bit as the test fails for these archs due to a tolerance issue. ------------------------------------------------------------------- Mon Jul 4 15:34:09 UTC 2022 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.12.1: * cost.BarlowBeestonLite: method “hpd” has been modified to fix performance in cases where bins are not dominated by a single template. ------------------------------------------------------------------- Wed Jun 22 00:09:52 UTC 2022 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.12.0: * New - New cost function cost.BarlowBeestonLite for template fits with templates obtained from simulation or sWeighted data - Formerly private chi2 utility cost functions (cost.poisson_chi2, etc.), are now part of public API - Support custom grid in Minuit.profile, iminuit.mncontour, iminuit.contour - Handle common CL values in Minuit.mnprofile and Minuit.mncontour without scipy * Fixes - Skip tests that use np.float128 on platforms where this type is not supported - Minuit.valid now returns False if EDM is NaN - subtract_min setting is no longer ignored by Minuit.draw_contour * Documentation: New study about template fits * Minuit no longer warns when a function is used that has no errordef attribute and Minuit.errordef is not explicitly set. The function is assumed to be chi-square-like up to an arbitrary constant, unless errordef is explicitly set to something else. * More type correctness in API, better hiding of private objects in library * Add option to use external pybind11 - Pass cmake option to build against external pybind11; add BuildRequires: python-pybind11 and python-pybind11-devel and remove bundled pybind11 from source dir. ------------------------------------------------------------------- Sun May 1 19:11:29 UTC 2022 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.11.2: * Fixed wording in cost function tutorial - Changes from version 2.11.1: * Fixed a failure of util.make_with_signature in some situations. * Raise numpy.VisibleDeprecationWarning instead of warnings.DeprecationWarning. * util.propagate is deprecated in favour of jacobi.propagate from the jacobi library. - Changes from version 2.11.0: * All builtin cost functions now support multidimensional data * Matrix.to_dict was added for symmetry with BasicValueView.to_dict * For long-running fits, total runtime is now shown in FMin display and total runtime can be accessed via property FMin.time * In binned fits when ndof is zero, show reduced chi2 = nan in the FMin display instead of raising a ZeroDivisionError * Tutorials and studies are now listed separately * Tutorial for fits of multivariate data were added * The cost function tutorial was improved * Studies in regard to performance were added, including a comparison with RooFit ------------------------------------------------------------------- Sat Mar 5 15:40:18 UTC 2022 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.10.0: * Minuit.draw_mncontour now works with matplotlib >= 3.5. * Builtin cost functions now work correctly when the mask is set and data is updated on the existing cost function. * Builtin cost functions are now more performant when used with weighted binned data. ------------------------------------------------------------------- Thu Jan 20 12:26:34 UTC 2022 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.9.0: * Minuit.draw_mncontour now works with matplotlib >= 3.5. * Builtin cost functions now work correctly when the mask is set and data is updated on the existing cost function. * Builtin cost functions are now more performant when used with weighted binned data. ------------------------------------------------------------------- Wed Dec 8 14:38:34 UTC 2021 - pgajdos@suse.com - version update to 2.8.4 Fixes * Pickling of util.Matrix resulted in incomplete state after unpickling, which would cause an exception when you tried to print the matrix Documentation * New tutorial on fitting PDFs that depend on a conditional variable * Fixed JAX tutorial, adapting to change in their interface * Extended documentation of cost functions ------------------------------------------------------------------- Thu Sep 16 10:35:47 UTC 2021 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.8.3: * util.propagate now discriminates between diverging derivates (using the value NaN for the derivate) and non-converging derivatives (using the best value computed so far for the derivative). * Update documentation. - Changes from version 2.8.2: * Minuit.draw_mncontour can now be used by passing a single float to keyword cl, in addition to passing a list of floats. * Use pybind11::ssize_t everywhere instead of non-standard ssize_t to fix compilation against Python-3.10 on Windows. * Update documentation. ------------------------------------------------------------------- Mon Aug 9 21:49:01 UTC 2021 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.8.1: * Undocumented changes. ------------------------------------------------------------------- Wed Jul 28 11:36:59 UTC 2021 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.8.0: * Minor API change: Minuit.mncontour now raises RuntimeError instead of ValueError if it is not called at a valid minimum point. * New features: Minuit.mncontour can now be called at any point without running a minimiser before, similar to Minuit.minos. * Fixes: Minuit.mncontour used to fail if called twice in a row. ------------------------------------------------------------------- Thu Jun 17 18:46:27 UTC 2021 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.6.1: * Calling Minuit.fixed[...] = False on parameter that was not fixed before lead to undefined behaviour in Minuit2 C++ code (patch submitted to ROOT). * Upgrade Minuit2 C++ code to latest ROOT master with simplified internal class structure and class tags replaced with enums. ------------------------------------------------------------------- Wed May 5 00:10:39 UTC 2021 - Atri Bhattacharya <badshah400@gmai.com> - Update to version 2.6.0: * Builtin cost functions now report the number of data points with the attribute Cost.ndata. * New attribute Minuit.ndof returns the degrees of freedom if the cost function reports it or NaN. * New attribute FMin.reduced_chi2 to report the reduced chi2 of the fit; returns NaN if the reduced chi2 cannot be computed for the cost function, in case of unbinned maximum-likelihood or when the attribute Cost.ndata is missing. ------------------------------------------------------------------- Thu Apr 22 00:58:19 UTC 2021 - Steve Kowalik <steven.kowalik@suse.com> - Do not build for Python 3.6, due to no NumPy. ------------------------------------------------------------------- Mon Feb 15 22:53:00 UTC 2021 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.4.0: * New features: - iminuit.minimize: Keyword method now accepts "migrad" and "simplex". - iminuit.minimize: Keyword option now supports keyword "stra" to set Minuit.strategy. - iminuit.minimize: OptimizeResult.message now states if errors are not reliable. * Minuit now supports functions wrapped with functools.partial. * Upgrade Minuit2 C++ code in ROOT to latest master with following improvements: - improvement of seed when using an analytical gradient. - fix of last minimum state added twice to vector of minimum states in some cases (saves a bit of memory). * Documentation improvements. * Updated tutorial about automatic differentiation, added comparison of numba.njit and jax.jit. - Changes from version 2.3.0: * New features: iminuit.cost.BinnedNLL and iminuit.cost.ExtendedBinnedNLL now support weighted binned data. * Bug-fixes: FMin.edm_goal now remains unchanged if Minuit.hesse is run after Minuit.migrad. * Other: Update to cibuildwheels-1.8.0 and workflow simplification. ------------------------------------------------------------------- Mon Dec 28 02:08:11 UTC 2020 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.2.1: * New features - Minuit.profile, Minuit.mnprofile, Minuit.contour, Minuit.draw_profile, Minuit.draw_mnprofile, and Minuit.draw_contour can now be called with subtract_min=True even if Minuit.fmin is None. - iminuit.__version__ now also displays the ROOT version of the C++ Minuit2 library. - Support for adding constant numbers to cost functions, this allows you to write sum(cost1, cost2, ...) and may be useful to subtract a constant bias from the cost. * Other - Documentation improvements - Further transition to numpydoc. - Clarified that iminuit is based on ROOT code - List full iminuit version including ROOT version in docs. - Added type hints to many interfaces (incomplete). - Renamed iminuit._minuit to iminuit.minuit, making the module public. - Renamed iminuit._minimize to iminuit.minimize, making the module public. - pydocstyle added to pre-commit checks. ------------------------------------------------------------------- Mon Dec 21 15:12:23 UTC 2020 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.2.0: * New features: - Cost functions in iminuit.cost are now additive, creating a new cost function with the union of parameters that returns the sum of the results of the individual cost functions. - iminuit.cost.NormalConstraint was added as a means to add soft constraints on a parameter, can also be used to set up a covariance matrix between several parameters. * Other: Documentation improvements, started transition to numpydoc - Drop _service file and tests.tar.xz source, since tests are now included in the iminuit source tarball. ------------------------------------------------------------------- Sat Dec 12 02:08:39 UTC 2020 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 2.0.0: * Long list of changes, see <https://iminuit.readthedocs.io/en/stable/changelog.html#december-7-2020>. - Add _service file to download tests from github directly as they are not included in the pypi tarball any more (gh#scikit-hep/iminuit#572). - New BuildRequires: cmake >= 3.13. ------------------------------------------------------------------- Sun Nov 29 17:18:42 UTC 2020 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 1.5.4: Fixed broken sdist package in 1.5.3 - Changes from version 1.5.3: * Fixed a crash when throw_nan=True is used and the throw is triggered. * Add python_requires (gh#scikit-hep/iminuit#496) by @henryiii. * Fixed buggy display of text matrix if npar != 2 (gh#scikit-hep/iminuit#493). * Switch extern Minuit2 repo to official root repo (gh#scikit-hep/iminuit#500), ROOT state: a5d880a434. * Add ngrad and ngrad_total to FMin display, rename ncalls to nfcn_total (gh#scikit-hep/iminuit#489). * Use __getattr__ to hide deprecated interface from Python help() (gh#scikit-hep/iminuit#491). * Improvements to tutorials by @giammi56. * Show number of gradient calls in FMin display (if nonzero) instead of errordef value. * Deprecated: - Minuit.ncalls, use Minuit.nfcn instead - Minuit.ngrads, use Minuit.ngrad instead ------------------------------------------------------------------- Sat Oct 31 14:20:33 UTC 2020 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 1.5.2: - Fixed regression of the convergence rate of Minuit.migrad for low precision cost functions by restoring a heuristic that calls Migrad several times if convergence is not reached on first try; made this heuristic configurable with iterate keyword. - Clarify in FMin display how the EDM convergence criterion uses the EDM goal. - Changes from version 1.5.1: - Fixed mistake in “parameter at limit” warning, which did not report correctly if parameter was at the upper limit. - Changes from version 1.5.0: * New features - New more compact function minimum display with warning about parameters at limit. - Colours adjusted in HTML display to enhance contrast for people with color blindness. - Allow subclasses to use Minuit.from_array_func (gh#scikit-hep/iminuit#467). - Nicer tables on terminal thanks to unicode characters. - Wrapped functions’ parameters are now recognised by iminuit. - Dark theme friendlier HTML style (gh#scikit-hep/iminuit#481). * Bug-Fixes - Fixed reported EDM goal for really small tolerances. - Minuit.np_merrors now works correctly when some parameters are fixed. - Fixed HTML display of Minuit.matrix when some diagonal elements are zero. * Deprecated - Removed nsplit option from Minuit.migrad (gh#scikit-hep/iminuit#462). ------------------------------------------------------------------- Wed Aug 5 10:13:54 UTC 2020 - Atri Bhattacharya <badshah400@gmail.com> - Update to version 1.4.9: * Fixes an error introduced in 1.4.8 in Minuit.minos when var keyword is used and at least one parameter is fixed. - Changes from versions 1.3.9 through 1.4.8: See https://iminuit.readthedocs.io/en/stable/changelog.html. - Drop python2 builds: no longer supported upstream. - Drop python-pytestrunner BuildRequires for test in favour of python-pytest. - Fix unresolved status for Leap 15.x on account of multiple choices for python3-importlib-metadata (python3-importlib-metadata and python3-importlib_metadata). - Simplify %check section by dropping directory renaming (no longer seems to be needed). ------------------------------------------------------------------- Wed Nov 20 20:04:06 UTC 2019 - Todd R <toddrme2178@gmail.com> - Update to 1.3.8 * fixed internal plotting when Minuit.from_array_func is used * documentation updates * reproduceable build ------------------------------------------------------------------- Tue Aug 27 05:17:52 UTC 2019 - Jan Engelhardt <jengelh@inai.de> - Trim filler wording from descriptions. ------------------------------------------------------------------- Mon Aug 19 12:38:42 UTC 2019 - Atri Bhattacharya <badshah400@gmail.com> - Initial version.
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