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File python-sunpy.changes of Package python-sunpy
------------------------------------------------------------------- Thu Sep 26 08:27:24 UTC 2024 - Ben Greiner <code@bnavigator.de> - Update to 6.0.2 ## Bug Fixes * Fix filetype detection to use the detected filetype if a known reader is registered. (#7788) * Fixed loading of ~sunpy.map.sources.ADAPTMap if sunkit-magex v1.0.0 is installed. (#7798) * Fixed loading of GOES XRS files with newer versions of numpy ------------------------------------------------------------------- Sat Aug 17 13:51:40 UTC 2024 - Ben Greiner <code@bnavigator.de> - Update to 6.0.1 ## Bug Fixes * Fixed incorrect reference_date for GONG Synoptic maps. (#7758) * Fix :func:`sunpy.physics.differential_rotation.differential_rotate` to update the reference_date attribute of the input map instead of the date. (#7758) * Fixed incorrect reference_date for SDO/AIA and SDO/HMI data to use the T_OBS keyword instead of the DATE-OBS keyword. * For AIA images, the location of SDO has been shifted up to a second in time, which corresponds to a shift in Heliographic Longitude by only 4 milliarcseconds. (#7758) - Release 6.0.0 ## Breaking Changes * Arguments for ~sunpy.map.GenericMap.reproject_to after the target WCS are now keyword-only. (#7339) * Arguments for sunpy.timeseries.GenericTimeSeries.peek are now keywords only. (#7340) * Removed scikit-image from the "image" extra group and created a new "scikit-image" extra group. (#7536) * sunpy.io.read_file and sunpy.io.write_file are deprecated and will be removed in the future. These were intended to be private functions and should not be used. (#7537) * The ANA C code has been deprecated (sunpy.io.ana.read, sunpy.io.ana.get_header, sunpy.io.ana.write) and may be removed in a future sunpy release. Please contact us here: https://community.openastronomy.org/t/possible-deprecation-of-ana-file-readers-and-writers-in-sunpy if you are making use of this code. (#7642) * The .EUIMap class now returns the DATE-BEG key for .GenericMap.date while continuing to use DATE-AVG as the reference date for the coordinate system. (#7682) * The .GenericMap.date key priority order has changed to be consistent with it representing the "canonical" observation time. DATE-OBS continues to have the highest priority, but now DATE-BEG has higher priority than DATE-AVG. (#7682) * A new property .GenericMap.reference_date has been added to decouple the reference date for the coordinate system from the "canonical" observation time. This new property is now passed through to the map's WCS object as dateavg and is the time used for .GenericMap.coordinate_frame and .GenericMap.observer_coordinate. (#7682) ## Deprecations * ~sunpy.coordinates.Helioprojective.assume_spherical_screen has been deprecated in favor of ~sunpy.coordinates.SphericalScreen. (#7115) * sunpy.physics.differential_rotation.diff_rot has been deprecated and replaced by sunpy.sun.models.differential_rotation. (#7409) * Deprecated all positional arguments in sunpy.map.GenericMap.plot method. The annotate, axes, title, clip_interval arguments should be passed as keyword arguments (e.g., ..., title=True, ...) instead. (#7421) * The keyword response_format in sunpy.net.vso.VSOClient.search has been deprecated. This was introduced to preserve legacy behaviour of the VSO client, to return sunpy.net.vso.legacy_response.QueryResponse instead of sunpy.net.vso.table_response.VSOQueryResponseTable objects. This behaviour has been the default for over 4 years and the keyword is no longer needed. This keyword and the older sunpy.net.vso.legacy_response.QueryResponse class will be removed in sunpy 7.0. The keyword progress in sunpy.net.hek2vso.H2VClient.full_query has been deprecated and will be removed in sunpy 7.0. (#7468) ## Removals * sunpy.database has been removed. (#7320) * sunpy.map.header_helper.meta_keywords has been removed. (#7337) * sunpy.net.helioviewer.HelioviewerClient has been removed. Use the hvpy package instead. (#7338) * There was a private "Maxwell" unit within sunpy.map to register it before astropy had support for it. This has now been removed in favour of using the astropy version. (#7383) ## New Features * sunpy.io.read_file will now try to detect the filetype based on the content and then fallback to using the file extension. (#6736) * It is now possible to read the comments in a header from a JPEG2000 file. (#6841) * Added the ability for sunpy.map.Map to load files from a generator. (#7024) * Added ~sunpy.coordinates.PlanarScreen for interpreting 2D ~sunpy.coordinates.Helioprojective coordinates as being on the inside of a planar screen. (#7115) * Added the ability to pass clip_interval to sunpy.map.mapsequence.MapSequence.plot. (#7253) * Add support for the fill keyword in ~sunpy.map.GenericMap.draw_contours to allow for filled contours. (#7281) * ~sunpy.coordinates.get_horizons_coord now supports time arrays with up to 10,000 elements. (#7319) * Add an example of plotting a rectangle on a map with a rotation angle relative to the axes (sphx_glr_generated_gallery_plotting_plot_rotated_rectangle.py). (#7348) * Added testing and explicit support for Python 3.12. (#7351) * Added warning when importing a submodule without installing that submodules extra dependencies. (#7369) * Added a warning message for rsun mismatch in ~sunpy.map.GenericMap.reproject_to method. (#7370) * Added a new optional extra group to install "opencv" if you want to it for affine transforms. pip install sunpy[opencv] #7383 * sunpy.map.GenericMap.draw_contours don't run internal transform code if transform keyword is provided. (#7427) * Update ASDF schemas for upcoming ASDF standard 1.6.0. (#7432) * Add a new map source ~sunpy.map.sources.gong.GONGHalphaMap for GONG H-Alpha data. (#7451) * Added ~sunpy.coordinates.spice.get_rotation_matrix to obtain the rotation matrix between the orientations of two SPICE frames, which is particularly useful for transforming vector fields. (#7452) * Allow units to be passed to ~sunpy.map.header_helper.make_fitswcs_header as strings. (#7454) * A new client (sunpy.net.dataretriever.ADAPTClient) has been added to search and download ADAPT files. (#7463) * sunpy.net.jsoc.JSOCClient queries now return the SUMS directory paths as the segment key value in the results table. (#7469) * Allow the screen radius to be set when using ~sunpy.coordinates.SphericalScreen. (#7532) * Updated sunpy.map.GenericMap.submap to check if it is about to work on locations with NaNs now errors and informs the user that they likely want to use ~sunpy.coordinates.Helioprojective.assume_spherical_screen so that the off-disk 2D coordinate can be converted to a 3D coordinate. (#7543) * ~sunpy.map.GenericMap will now assign units of DN without a warning or error. (#7585) * Add a new map source ~sunpy.map.sources.ADAPTMap for ADvanced Adaptive Prediction Technique (ADAPT) data files. (#7640) * Added support for JSOC's HMI millisecond TAI time format. Previously, it would only work with seconds. (#7656) * Added build support for aarch64 wheels. (#7679) ## Bug Fixes * Long object names are no longer truncated in the logging output of ~sunpy.coordinates.get_horizons_coord. (#7319) * When calling sunpy.map.GenericMap.rotate on an integer data array, with missing set to NaN (the default value), the method will now itself raise an informative error message instead deferring to NumPy to raise the error. (#7344) * Fixed the appearance of a double "Notes" heading in ~sunpy.map.Map subclasses. (#7376) * ~sunpy.map.Map with UINT8 data will now not error on plotting due to normalization. We now skip adding a normalization. (#7422) * When calling ~sunpy.map.GenericMap.reproject_to along with both context managers ~sunpy.coordinates.propagate_with_solar_surface and ~sunpy.coordinates.Helioprojective.assume_spherical_screen now raises a warning. (#7437) * Fix a bug which caused Fido.search to crash due to SSL certificate verification error for the ~sunpy.net.helio.HECClient now returns no results and logs a warning in this case. (#7446) * Fixed the sanitization of the names of files downloaded via VSO so that periods are no longer replaced and case is no longer forced to be lowercase. (#7453) * The creation of the series string for a JSOC query was not adding the correct escape characters for comparison values for keywords. This was causing the JSOC to error. (#7467) * The EVE L0CS client now uses the new URLs for the data from LASP. (#7483) * JPEG2000 files are now saved with the correct orientation. Previously they would be vertically flipped when saved. (#7486) * Fixed a very minor inaccuracy in three sunpy.map utility functions (~sunpy.map.contains_full_disk, ~sunpy.map.coordinate_is_on_solar_disk, and ~sunpy.map.is_all_off_disk) resulting from the accidental use of the small-angle approximation. (#7512) * The ~sunpy.map.GenericMap.rotate function now correctly updates the NAXISi. (#7522) * Added a check in sunpy.physics.differential_rotation.solar_rotate_coordinate to ensure the input frame has an "observer" attribute before replicating frame attributes, preventing potential issues with frames lacking this attribute. (#7526) * Fixed an inaccuracy in the implementation of ~sunpy.coordinates.HeliocentricEarthEcliptic and ~sunpy.coordinates.GeocentricSolarEcliptic such that the Earth was not exactly in the XY plane, but rather had an error of up ~10 meters. (#7530) * The maximum records in ~sunpy.net.helio.HECClient now are 20000. (#7540) * Fixed a bug with any coordinate transformation starting in ~sunpy.coordinates.GeocentricEarthEquatorial (GEI) returning output with AU as the length unit, rather than preserving the length unit of the initial coordinate. (#7545) * Fixed a bug that interfered with astropy.wcs.utils.celestial_frame_to_wcs when working with a custom subclass of ~sunpy.coordinates.frames.SunPyBaseCoordinateFrame. (#7594) * Fixed bug where conversion of results from the HEKClient to Astropy Time failed when some values where empty or missing for the values of event_strattime, event_endtime or event_peaktime (#7627) * Fix the ~sunpy.map.sources.gong.GONGHalphaMap.rsun_obs to use correct header information solar-r keyword. (#7652) * Fix compilation with gcc 14, avoid implicit pointer conversions. (#7662) * Fixed a bug where "DN" was not able to be parsed by ~sunpy.map.header_helper.make_fitswcs_header due to strict checking against the FITS standard. This is now consistent with how unit strings are parsed in ~sunpy.map.GenericMap. (#7730) * Fixed a bug where ~sunpy.map.sources.XRTMap was still defaulting to counts rather than DN. (#7744) ## Internal Changes * sunpy.net.jsoc.JSOCClient.fetch called drms API that passed a progress keyword which added extra print statements to the console. This has been removed in drms 0.7.0, which had breaking API changes within this release. As a result, we increased the minimum required version of drms to 0.7.1. * This specifically refers to the following information that was printed to the console by default: "Export request pending. [id=X, status=X]" "Waiting for X seconds..." "Request not found on server, X retries left." These were handled by drms and are now logging messages. If you want to silence these messages, you can set the logging level to WARNING or higher. import logging drms_logger = logging.getLogger("drms") drms_logger.setLevel(logging.WARNING) from sunpy.net import fido, attrs Note, you have to do it before you import fido. (#7307) * The function ~sunpy.coordinates.get_horizons_coord no longer calls the astroquery package, so astroquery is no longer a dependency. (#7319) * The requests package is a now formally a core dependency. requests was already commonly installed as an implied dependency of sunpy.net or for building documentation. (#7319) * ~sunpy.net.jsoc.attrs.Notify checks that a valid email address has been given as a value. (#7342) * The delim_whitespace keyword in pandas.read_csv is deprecated and was updated with sep='\s+'. This should have no affect on the output of the code. (#7350) * Fixed an environment-specific failure of a unit test for sunpy.coordinates.Helioprojective.is_visible. (#7356) * Moved to pyproject.toml and removed setup.py and setup.cfg. (#7384) * pyerfa is now a new direct dependency. It has been an indirect dependency from sunpy 3.1, over two years ago. (#7397) * Increased Python minimum version to be >= 3.10. (#7402) * Fixed an unnecessary division computation when performing a unsupported division operation using a ~sunpy.map.Map. (#7551) * Updated the internal URL for the ~sunpy.net.dataretriever.sources.norh.NoRHClient to point to a HTTPS archive of the NoRH data. (#7696) - Add sunpy-exclude-toplevel.patch ------------------------------------------------------------------- Thu Jul 11 08:57:36 UTC 2024 - Ben Greiner <code@bnavigator.de> - Revert restriction. https://github.com/sunpy/sunpy/blob/v5.1.4/pyproject.toml#L17 ------------------------------------------------------------------- Tue Jul 9 05:13:08 UTC 2024 - Steve Kowalik <steven.kowalik@suse.com> - Restrict numpy to < 2. ------------------------------------------------------------------- Mon Jun 10 19:26:13 UTC 2024 - John Paul Adrian Glaubitz <adrian.glaubitz@suse.com> - Update to 5.1.4 * Fixed bug where conversion of results from the HEKClient to Astropy Time failed when some values where empty or missing for the values of event_strattime, event_endtime or event_peaktime (#7627) * Fix compilation with gcc 14, avoid implicit pointer conversions. (#7662) - Drop patches for issues fixed upstream * https://github.com/sunpy/sunpy/pull/7662.patch ------------------------------------------------------------------- Thu Jun 6 07:53:25 UTC 2024 - John Paul Adrian Glaubitz <adrian.glaubitz@suse.com> - Cherry-pick upstream patch to fix build with GCC 14 * https://github.com/sunpy/sunpy/pull/7662.patch ------------------------------------------------------------------- Sat May 25 10:17:09 UTC 2024 - Ben Greiner <code@bnavigator.de> - Update to 5.1.3 * Fixed an unnecessary division computation for an unsupported division by a Map * numpy 2.0 * Enable use of SunPyBaseCoordinateFrame outside sunpy ------------------------------------------------------------------- Sun May 5 11:26:19 UTC 2024 - Ben Greiner <code@bnavigator.de> - Update to 5.1.2 * Fixed the appearance of a double "Notes" heading in ~sunpy.map.Map subclasses. (#7376) * Fix a bug which caused Fido.search to crash due to SSL certificate verification error for the ~sunpy.net.helio.HECClient now returns no results and logs a warning in this case. (#7446) * The creation of the series string for a JSOC query was not adding the correct escape characters for comparison values for keywords. This was causing the JSOC to error. (#7467) * JPEG2000 files are now saved with the correct orientation. Previously they would be vertically flipped when saved. (#7486) * Fixed a very minor inaccuracy in three sunpy.map utility functions (~sunpy.map.contains_full_disk, ~sunpy.map.coordinate_is_on_solar_disk, and ~sunpy.map.is_all_off_disk) resulting from the accidental use of the small-angle approximation. (#7512) * The ~sunpy.map.GenericMap.rotate function now correctly updates the NAXISi. (#7522) * Fixed an inaccuracy in the implementation of ~sunpy.coordinates.HeliocentricEarthEcliptic and ~sunpy.coordinates.GeocentricSolarEcliptic such that the Earth was not exactly in the XY plane, but rather had an error of up ~10 meters. (#7530) * Fixed a bug with any coordinate transformation starting in ~sunpy.coordinates.GeocentricEarthEquatorial (GEI) returning output with AU as the length unit, rather than preserving the length unit of the initial coordinate. (#7545) ------------------------------------------------------------------- Sun Jan 21 10:42:06 UTC 2024 - Dirk Müller <dmueller@suse.com> - update to 5.1.1: * Add an example of plotting a rectangle on a map with a rotation angle relative to the axes (:ref:`sphx_glr_generated _gallery_plotting_plot_rotated_rectangle.py`). * Added testing and explicit support for Python 3.12. * When calling :meth:`sunpy.map.GenericMap.rotate` on an integer data array, with missing set to NaN (the default value), the method will now itself raise an informative error message instead deferring to NumPy to raise the error. * Fixed the usage of :meth:`~sunpy.map.GenericMap.superpixel` in :ref:`sphx_glr_generated_gallery_map_map_resampling_and_su perpixels.py`. * Added Clarification on setting JSOC Email. * Added explanation text to :ref:`sphx_glr_generated_gallery_pl otting_plotting_blank_map.py` about the offset between "(0, 0)" in helioprojective coordinates and the heliographic equator. * The delim_whitespace keyword in pandas.read_csv is deprecated and was updated with sep='\s+'. This should have no affect on the output of the code. * Fixed an environment-specific failure of a unit test for :meth:`sunpy.coordinates.Helioprojective.is_visible`. ------------------------------------------------------------------- Fri Nov 24 12:51:22 UTC 2023 - Ben Greiner <code@bnavigator.de> - Update to 5.1.0 ## New Features * Added the ability to skip over errors raised for invalid fits files when passing a list of files to map using the existing keyword argument silence_errors. (#7018) * Added a sunpy.coordinates.Helioprojective.is_visible method to return whether the coordinate is visible (i.e., not obscured from the observer assuming that the Sun is an opaque sphere). (#7118) * Added a keyword option (quiet) for ~sunpy.coordinates.get_body_heliographic_stonyhurst to silence the normal reporting of the light-travel-time correction when observer is specified. (#7142) * Added the function sunpy.coordinates.sun.eclipse_amount to calculate the solar-eclipse amount for an observer. (#7142) * Add a keyword (map_center_longitude) to ~sunpy.map.header_helper.make_heliographic_header for centering the heliographic map at a longitude other than zero longitude. (#7143) * The minimum required version of Glymur (an optional dependency for reading JPEG2000 files) has been increase to 0.9.1. (#7164) * Added new default colormap scalings for WISPR Maps. Plots are now clipped at zero, and ~astropy.visualization.AsinhStretch is used for the scaling to ensure coronal details are visible despite the much-brighter stars. Parsing of the detector and level fields of the FITS headers is also improved. (#7180) * When creating a coordinate or coordinate frame without specifying obstime, the obstime value from the observer frame attribute will be used if present. (#7186) * Added a GONG synoptic map class which fixes non-compliant FITS metadata (#7220) * Added the module sunpy.coordinates.spice to enable the use of the ~astropy.coordinates.SkyCoord API to perform computations using SPICE kernels. (#7237) * Added three coordinate frames that depend on the orientation of Earth's magnetic dipole: ~sunpy.coordinates.Geomagnetic (MAG), ~sunpy.coordinates.SolarMagnetic (SM), and ~sunpy.coordinates.GeocentricSolarMagnetospheric (GSM). (#7239) ## Bug Fixes * Fix RHESSI (~sunpy.net.dataretriever.RHESSIClient) fallback server detection. (#7092) * Fix bug in ~sunpy.coordinates.get_horizons_coord when specifying a time range via a dictionary that could cause the returned times to be slightly different from the supplied times. (#7106) * Updated the url of the ~sunpy.net.dataretriever.GBMClient to match on files other than those that end with version 0 (i.e., V0.pha). (#7148) * When directly instantiating a ~astropy.wcs.WCS from a FITS header that contains both Stonyhurst and Carrington heliographic coordinates for the observer location, the Stonyhurst coordinates will now be prioritized. This behavior is now consistent with the ~sunpy.map.Map class, which has always prioritized Stonyhurst coordinates over Carrington coordinates. (#7188) * Fixed a bug with ~sunpy.map.sample_at_coords() where sampling outside the bounds of the map would sometimes not error and instead return strange pixel values. (#7206) * Improved code when loading CDF files to improve performance and avoid raising of pandas performance warnings. (#7247) * Fixed a bug with sunpy.map.GenericMap.plot where setting norm to None would result in an error. (#7261) ## Deprecations * Deprecated silence_errors in Map and Timeseries. This has been replaced with allow_errors keyword. (#7021) * The sunpy.coordinates.transformations module is now slated for removal from the public API as it consists of internal functions used by coordinate transformations. The context managers sunpy.coordinates.transform_with_sun_center and sunpy.coordinates.propagate_with_solar_surface should be accessed under sunpy.coordinates. (#7113) ## Removals * sunpy.map.extract_along_coord() has been removed. Instead, use ~sunpy.map.pixelate_coord_path, and then pass its output to ~sunpy.map.sample_at_coords. pixelate_coord_path uses a different line algorithm by default, but you can specify bresenham=True as an argument to use the same line algorithm as extract_along_coord. (#7200) * sunpy.visualisation.limb.draw_limb() has been removed. Use sunpy.visualization.drawing.limb instead. (#7202) * Removed GenericTimeSeries.index. Use GenericTimeseries.time instead as a direct replacement. (#7203) * Removed the deprecated sunpy.io.cdf submodule, which is not intended to be user facing. (#7240) * Removed the deprecated sunpy.io.jp2, which is not intended to be user facing. (#7241) * Removed the deprecated sunpy.io.file_tools, which is not intended to be user facing. (#7242) * The deprecated sunpy.data.download_sample_data() has been removed Use sunpy.data.sample.download_all instead. (#7250) ## Internal Changes * Removed the Binder configuration and link in README. This is because the configuration was untested, and does not currently work. (#7062) * Add a Dependabot config file to auto-update GitHub action versions. (#7068) * Add tests to check whether various ~sunpy.map.Map methods preserve laziness when operating on Maps backed by a dask.array.Array. (#7100) * Added missing support to find GOES-18 XRS data in ~sunpy.net.dataretriever.XRSClient. (#7108) * Raise an error with a helpful message when sunpy.map.GenericMap.plot is called with a non-boolean value for the annotate keyword, because the user is probably trying to specify the axes. (#7163) * Fixed our ASDF manifest having the incorrect ID. (#7282) * Fix example formatting in a few asdf schemas. (#7292) * Pinned the drms requirement to < 0.7 to avoid breaking changes in drms version 0.7. (#7308) ------------------------------------------------------------------- Thu Sep 14 14:02:59 UTC 2023 - Markéta Machová <mmachova@suse.com> - Update to 5.0.1 * Fix RHESSI (RHESSIClient) fallback server detection. * Fix bug in get_horizons_coord() when specifying a time range via a dictionary that could cause the returned times to be slightly different from the supplied times. * Updated the url of the GBMClient to match on files other than those that end with version 0 * Added missing support to find GOES-18 XRS data in XRSClient. - Really drop python-311.patch ------------------------------------------------------------------- Fri Aug 4 07:25:16 UTC 2023 - Steve Kowalik <steven.kowalik@suse.com> - Update to 5.0.0: * `~sunpy.net.dataretriever.XRSClient` now provides the re-processed GOES-XRS 8-15 data from NOAA. * Changed the output of :func:`sunpy.map.sample_at_coords` to return the sampled values as `~astropy.units.Quantity` with the appropriate units instead of merely numbers. * Able to run the ``sunpy`` tests doing ``python -m sunpy.tests.self_test``. * Able to detect gzip-compressed FITS files even if they don't have the ``.gz`` extension in the filename. `~sunpy.io.detect_filetype` now looks for the right file signature while checking for gzipped FITS files. * Added ``AttrAnd`` and ``AttrOr`` to the namespace in ``sunpy.net.attrs``. * `~sunpy.net.dataretriever.SUVIClient` now provides GOES-18 SUVI data. * The minimum required versions of several core dependencies have been updated: + Python 3.9 + astropy 5.0.1 + numpy 1.21.0 * Added the utility function :func:`sunpy.map.pixelate_coord_path` to fully pixelate a coordinate path according to the pixels of a given map. * Able to download files from REST/TAP Data Providers from the VSO. * Adding data unit into html repr for `sunpy.map.Map` * Joined ``HISTORY`` keys with newline characters when parsing ``HISTORY`` cards from FITS header. * Added the ability to query for the GOES-XRS 1 minute average data with the `.XRSClient`. * Increased minimum version of `parfive` to 2.0.0. * Fixed the incorrect calculation in sunpy.map.header_helper.make_fitswcs_header` of the rotation matrix from a rotation angle when the pixels are non-square. * Fixed an issue with loading old EIT fits files with `sunpy.map.Map` where the date could not be parsed. * Fixed a bug where the `~sunpy.map.GenericMap.exposure_time` returned ``None`` when the exposure time key was set to zero. * HMI JPEG2000 files from Helioviewer could not be loaded due to a bug in setting the plotting normalization. * The ``data_manager`` was not raising failed downloads correctly and would continue as if the file existed locally. * `~sunpy.map.sources.XRTMap` will now set the unit for XRT files if the ``BUNIT`` key is missing. * `~sunpy.net.dataretriever.XRSClient` update use the new url for which the GOES-XRS 8-15 data is provided by NOAA. * Updated `~sunpy.database` to be compatible with ``SQLAlchemy`` versions >=2.0 * When using ``autoalign=True`` when plotting maps, the result was misaligned by half a pixel. * :meth:`sunpy.map.GenericMap.submap` can now handle a `~astropy.coordinates.BaseCoordinateFrame` as input. * Multi-line ``HISTORY`` and ``COMMENT`` keys metadata dictionaries are now correctly split into multiple history and comment cards when writing a FITS file. * Pass in "max_splits" to Parfive to prevent multi connections to JSOC for JSOC only queries. * When converting an `astropy.wcs.WCS` object to a solar coordinate frame the ``DATE-AVG`` key will be used before the ``DATE-OBS`` key, previously only ``DATE-OBS`` was checked. * `sunpy.map.GenericMap.rotation_matrix` now applies the default values if any FITS rotation matrix keywords are missing from the header. * Modified :func:`sunpy.io.special.srs.read_srs` to correctly handle uppercase SRS files and supplementary sections occurring after the main data sections. - Drop patch python-311.patch, no longer required. - Switch to pyproject macros. - Reinstate dask for python311, numba exists now. ------------------------------------------------------------------- Thu Mar 23 06:53:31 UTC 2023 - Ben Greiner <code@bnavigator.de> - Don't test with dask for python311: No numba yet ------------------------------------------------------------------- Mon Feb 27 12:48:29 UTC 2023 - Daniel Garcia <daniel.garcia@suse.com> - Remove patch sunpy-pr6662-np1.24.patch - Add patch python-311.patch to support python 3.11, gh#sunpy/sunpy#6512 - Update to v4.1.3 * Backport PR #6740 on branch 4.1 (Exclude scipy==1.10.0 in deps) by @meeseeksmachine in #6746 * Backport PR #6749 on branch 4.1 (Unpin and update database for SQLA 2.0) by @meeseeksmachine in #6750 * Backport PR #6731 on branch 4.1 (fig-devdeps : Have to add a unit to lon.coord_wrap) by @meeseeksmachine in #6753 * Backport PR #6711 on branch 4.1 (Raise error if downloader for cache fails) by @meeseeksmachine in #6755 * Backport PR #6725 on branch 4.1 (add unit detection for XRT data) by @meeseeksmachine in #6761 * Backport PR #6737 on branch 4.1 (Updating the GOES-XRS baseurl following change on noaa side) by @meeseeksmachine in #6762 * Backport PR #6710 on branch 4.1 (Fix init issue for JP2 HMI images from helioveiwer) by @meeseeksmachine in #6765 * Backport PR #6648 on branch 4.1 (Fix draw_quadrangle() so that it accepts frames with data) by @meeseeksmachine in #6777 - v4.1.2 * Backport PR #6694 on branch 4.1 (pin sqlalchemy<2.0 and ignore warning for now) by @meeseeksmachine in #6697 * Backport PR #6693 on branch 4.1 (detect gzipped-FITS files by magic-bytes) by @meeseeksmachine in #6700 * Backport PR #6702 on branch 4.1 (fix the extremely minor issue in Fido docs) by @meeseeksmachine in #6704 * Backport PR #6712 on branch 4.1 (Add changelog entry for sqlalchemy pin) by @meeseeksmachine in #6714 * Backport PR #6728 on branch 4.1 (Fix HISTORY key in test maps created from header files) by @meeseeksmachine in #6730 - v4.1.1 * Added three tutorials which replicate ~sunpy.map.CompositeMap functionality (sphx_glr_generated_gallery_plotting_AIA_HMI_composite.py, sphx_glr_generated_gallery_plotting_masked_composite_plot.py, sphx_glr_generated_gallery_plotting_three_map_composite.py). A fourth tutorial (sphx_glr_generated_gallery_plotting_rgb_composite.py) demonstrates how to create an RGB image with three different maps. (#6459) * Fixed the incorrect calculation in ~sunpy.map.header_helper.make_fitswcs_header of the rotation matrix from a rotation angle when the pixels are non-square. (#6597) * Fixed an issue with loading old EIT fits files with sunpy.map.Map where the date could not be parsed. (#6605) * Added sunpy.map.PixelPair to the reference documentation. (#6620) ------------------------------------------------------------------- Sat Dec 24 10:50:52 UTC 2022 - Ben Greiner <code@bnavigator.de> - Add sunpy-pr6662-np1.24.patch gh#sunpy/sunpy#6662 * Ignore deprecation message from numpy 1.24 ------------------------------------------------------------------- Mon Nov 21 16:45:44 UTC 2022 - Ben Greiner <code@bnavigator.de> - Update to v4.1.0 ## Breaking Changes * Updated the sample data file, AIA_171_ROLL_IMAGE to be rice compressed instead of gzip compressed. This means that the data is now stored in the second HDU. (#6221) ## Deprecations * Passing positional arguments to all timeseries peek() methods is now deprecated, and will raise an error in sunpy 5.1. Pass the arguments with keywords (e.g. title='my plot title') instead. (#6310) * Using sunpy.timeseries.GenericTimeSeries.index is deprecated. Use ~sunpy.timeseries.GenericTimeSeries.time to get an astropy Time object, or ts.to_dataframe().index to get the times as a pandas DataTimeIndex. (#6327) * Deprecated the sunpy.visualization.limb module. The sunpy.visualization.limb.draw_limb function has been moved into ~sunpy.visualization.drawing as ~sunpy.visualization.drawing.limb. (#6332) * The sunpy.net.helioviewer module is deprecated and will be removed in version 5.1. The Helioviewer Project now maintains a replacement Python library called hvpy. As such, in consultation with the Helioviewer Project, we have decided to deprecate the HelioviewerClient class. (#6404) * Passing the algorithm, return_footprint arguments as positional arguments is deprecated. Pass them as keyword arguments (e.g. ..., return_footprint=True, ...) instead. (#6406) * sunpy.data.download_sample_data is now deprecated. Use sunpy.data.sample.download_all instead. (#6426) * The sunpy.database module is no longer actively maintained and has a number of outstanding issues. It is anticiapted that sunpy.database will be formally deprecated in sunpy 5.0 and removed in sunpy 6.0. If you are using sunpy.database and would like to see a replacement, please join the discussion thread at https://community.openastronomy.org/t/deprecating-sunpy-database/495. (#6498) ## Removals * The sunpy.io.fits sub-module has been removed, as it was designed for internal use. Use the astropy.io.fits module instead for more generic functionality to read FITS files. (#6432) * The sunpy.physics.solar_rotation sub-module has been removed, having been moved to sunkit_image.coalignment. (#6433) * Most of the sunpy.visualization.animator subpackage has been removed, with the exception of ~sunpy.visualization.animator.MapSequenceAnimator It has been moved into the standalone mpl-animators package Please update your imports to replace sunpy.visualization.animator with mpl_animators. (#6434) * Remove GenericMap.shift method and the GenericMap.shifted_value. Use ~sunpy.map.GenericMap.shift_reference_coord instead. (#6437) * sunpy.util.scraper has been removed. Use sunpy.net.scraper instead. (#6438) * sunpy.image.coalignment has been removed. Use sunkit_image.coalignment instead, which contains all the same functionality. (#6440) * sunpy.map.GenericMap.draw_limb can no longer be used to draw the limb on a non-WCS Axes plot. (#6533) * sunpy.image.resample no longer accepts "neighbour" as an interpolation method. Use "nearest" instead. (#6537) * sunpy.image.transform.affine_transform and sunpy.map.GenericMap.rotate no longer accepts the use_scipy keyword. (#6538) ## New Features * Updated and expanded the HTML representation for ~sunpy.timeseries.TimeSeries. (#5951) * When reading CDF files, any columns with a floating point data type now have their masked values converted to NaN. (#5956) * Add support for saving ~sunpy.map.GenericMap as JPEG 2000 files. (#6153) * Add a function sunpy.map.extract_along_coord that, for a given set of coordinates, finds each array index that crosses the line traced by those coordinates and returns the value of the data array of a given map at those array indices. (#6189) * Three new maps have been added to the sample data from STEREO A and STEREO B at 195 Angstrom, and AIA at 193 Angstrom. These images are from a time when the three spacecraft were equally spaced around the Sun, and therefore form near complete instantaneous coverage of the solar surface. * Users upgrading to this version will find this three files download when they use the sample data for the first time. (#6197) * Added a SDO/AIA 1600 file of the Venus transit to the sunpy sample data. (#6242) * Created the sunpy.visualization.drawing module which includes new ~sunpy.visualization.drawing.equator and ~sunpy.visualization.drawing.prime_meridian functions. (#6251) * Expose GOES quality flags in order to allow filtering corrupt values when using the ~sunpy.timeseries.sources.goes.XRSTimeSeries. (#6260) * All TimeSeries plotting methods now consistently set the same formatter and locator for the x-axis. (#6264) * sunpy.timeseries.GenericTimeSeries.peek now takes a title argument to set the title of the plot. (#6304) * Added the sunpy.timeseries.GenericTimeSeries.time property to get the times of a timeseries as a ~astropy.time.Time object. (#6327) * Added the sphx_glr_generated_gallery_plotting_plot_equator_prime_meridian.py example to the Example Gallery. (#6332) * Added a new function sunpy.map.header_helper.make_heliographic_header to help with generating FITS-WCS headers in Carrington or Stonyhurst coordinate systems that span the entire solar surface. (#6415) * Sample data files provided through sunpy.data.sample are now downloaded individually on demand rather than being all downloaded upon import of that module. To download all sample data files, call sunpy.data.sample.download_all. (#6426) * ~.XRSTimeSeries is now able to parse the primary detector information from the GOES-R XRS data if available. (#6454) * sunpy.net.Scraper now includes treats files as spanning a full interval equal to the smallest increment specified in the file pattern. For example, a pattern like "%Y.txt" that only contains a year specifier will be considered to span that full year. * This means searches that fall entirely within the whole interval spanned by a pattern will return that file, where previously they did not. As an example, matching "%Y.txt" with TimeRange('2022-02-01', '2022-04-01') will now return ["2022.txt"] where previously no files were returned. (#6472) * Implemented site configuration for sunpyrc, and modified documentation for sunpy customization. (#6478) * ~sunpy.map.header_helper.make_fitswcs_header now includes the keyword argument unit for setting the BUNIT FITS keyword in the resulting header. This will take precedence over any unit information attached to data. (#6499) * If the data argument to ~sunpy.map.header_helper.make_fitswcs_header is an ~astropy.units.Quantity, the associated unit will be used to set the BUNIT FITS keyword in the resulting header. (#6499) * Added a 304 sample data file called AIA_304_IMAGE. (#6546) ## Bug Fixes * Fix a bug that prevented EUI maps with missing wavelength. - Release 4.0.7 ## Bug Fixes * Fixed the incorrect calculation in ~sunpy.map.header_helper.make_fitswcs_header of the rotation matrix from a rotation angle when the pixels are non-square. (#6597) * Fixed bug that prevented ~sunpy.coordinates.metaframes.RotatedSunFrame instances from being pickled. (#6342) * The right-hand y-axis of the GOES-XRS timeseries plots with labelled flare classes now automatically scales with the left-hand y-axis. (#6486) * Add support for Python 3.11. * The deprecated cgi.parse_header is now available as sunpy.util.net.parse_header. (#6512) * Fixed the metadata handling of ~sunpy.map.GenericMap.resample and ~sunpy.map.GenericMap.superpixel so that the CDELTi values are scaled and the PCi_j matrix (if used) is modified in the correct manner for asymmetric scaling. The previous approach of having the PCi_j matrix store all of the scaling resulted in non-intuitive behaviors when accessing the ~sunpy.map.GenericMap.scale and ~sunpy.map.GenericMap.rotation_matrix properties, and when de-rotating a map via ~sunpy.map.GenericMap.rotate. (#6571) * Fixed a bug with the sunpy.map.GenericMap.rotation_matrix property for maps using the CDij matrix formulism where the rotation matrix would be calculated incorrectly for non-square pixels. (#6573) * Fixd a bug with the sunpy.map.GenericMap.scale property for maps containing only the CDij matrix where the scale was not being determined from the CDij matrix. (#6573) * Fixed a bug where ~sunpy.time.parse_time would always disregard the remainder of a time string starting with the final period if it was followed by only zeros, which could affect the parsing of the time string. (#6581) ------------------------------------------------------------------- Mon Nov 7 17:34:30 UTC 2022 - Ben Greiner <code@bnavigator.de> - Update to v4.0.6 * Fix a bug in loading .XRSTimeSeries due to unsupported quality flag column names. (#6410) * Adds units (dimensionless units) to the quality columns in .XRSTimeSeries. (#6423) * Refactored ~sunpy.map.sources.SXTMap to use ITRS observer coordinate information in header rather than incorrect HGS keywords. The ~sunpy.map.sources.SXTMap also now uses the default dsun property as this information can be derived from the (now corrected) observer coordinate. (#6436) * In sunpy.map.GenericMap.coordinate_system and sunpy.map.GenericMap.date, the default values will now be used if the expected key(s) used to derive those properties are empty. Previously, empty values of these keys were not treated as missing and thus the default values were not correctly filled in. (#6436) * Fixed a bug where the observer coordinate was incorrectly determined for ~sunpy.map.sources.KCorMap. (#6447) * Trying to download an empty search response from the JSOC now results in an empty results object. Previously the results object contained the path to the sunpy download directory. (#6449) * Removed an error when searching CDAWEB using sunpy.net.Fido and no results are returned. An empty response table is now returned. (#6450) * Fix a bug to parse the GOES "observatory" number in ~.XRSTimeSeries for GOES 13, 14, 15 and for the 1 minute GOES-R data. (#6451) * Changed the default scaling for ~sunpy.map.sources.XRTMap from a linear stretch to ~astropy.visualization.LogStretch. * To revert to the previous linear stretch do the following: from astropy.visualization import ImageNormalize, LinearStretch xrtmap.plot_settings["norm"] = ImageNormalize(stretch=LinearStretch()) (#6480) * Fix the detector property of ~sunpy.map.sources.SOTMap to return "SOT". (#6480) - Release v4.0.5 * Test data cleanup (#6065) by @nabobalis in #6354 * Minor improvements to data acquisition guide * Allow EVE to have two additional files in Fido search test * pin version of jsonschema * Removes lingering use of Astropy's matrix_product() * Fix Matplotlib colormap deprecation * Fix the ordering of the API docs * Fix adaptive reproject test with reproject 0.9 * Fix Matplotlib get_cmap deprecation * Change the jsoc email to a sunpy one - Drop sunpy-scikit-image-deprecation.patch ------------------------------------------------------------------- Thu Aug 11 11:45:37 UTC 2022 - Ben Greiner <code@bnavigator.de> - Update to v4.0.4 * update metadata for pypi page * Add bugfix release policy to docs * Update license year - Release v4.0.3 * Fixed ~sunpy.timeseries.sources.XRSTimeSeries inability to read leap-second files for GOES. It floors the leap-second timestamp to be 59.999, so that Python datetime does not raise an exception. (#6262) * Fixed bugs when working with a coordinate frame where the observer is specified in ~sunpy.coordinates.frames.HeliographicStonyhurst with a Cartesian representation, which is equivalent to Heliocentric Earth Equatorial (HEEQ). Now, the observer will always be converted to spherical representation when the coordinate frame is created. (#6311) * Fixed an error when Fido returns zero results from the VSO and some results from at least one other data source. This (now fixed) error is only present when using numpy version >= 1.23. (#6318) ------------------------------------------------------------------- Mon Jun 27 12:26:19 UTC 2022 - Ben Greiner <code@bnavigator.de> - Update to v4.0.2 * Added a SDO/AIA 1600 file of the Venus transit to the sunpy sample data. (#6242) * Expose GOES quality flags in order to allow filtering corrupt values when using the ~sunpy.timeseries.sources.goes.XRSTimeSeries. (#6260) * The sunpy.net.dataretriever.sources.noaa.SRSClient was not correctly setting the passive mode for FTP connection resulting in a permission error. This has been fixed. (#6256) * Changed the default scaling for ~sunpy.map.sources.EUIMap from a linear stretch to a asinh stretch. To revert to the previous linear stretch do the following: from astropy.visualization import ImageNormalize, LinearStretch euimap.plot_settings["norm"] = ImageNormalize(stretch=LinearStretch()) * Add support for upcoming parfive 2.0 release. (#6243) * The primary sample-data URL will be changing from https://github.com/sunpy/sample-data/raw/master/sunpy/v1/ to https://github.com/sunpy/data/raw/main/sunpy/v1/. We expect GitHub to redirect from the old URL for sometime but will eventually expire it. The data.sunpy.org mirror will continue to be available. (#6289) * Add support for downloading sample data from more than two mirror locations. (#6295) - Relese 4.0.1 * Updated the sample data file, AIA_171_ROLL_IMAGE to be rice compressed instead of gzip compressed. This means that the data is now stored in the second HDU. (#6221) * Three new maps have been added to the sample data from STEREO A and STEREO B at 195 Angstrom, and AIA at 193 Angstrom. These images are from a time when the three spacecraft were equally spaced around the Sun, and therefore form near complete instantaneous coverage of the solar surface. * Users upgrading to this version will find this three files download when they use the sample data for the first time. (#6197) * Fix a bug that prevented EUI maps with missing wavelength metadata loading. (#6199) * Improved annotations in the SRS active regions plotting example. (#6196) * Updated gallery examples that use STEREO data to use sample data instead of searching for and downloading data via Fido. (#6197) * Updated the info_url for the ~sunpy.net.dataretriever.sources.goes.XRSClient to account for the different default sources that vary based on GOES satellite number. (#6152) * Added automatic conversion of unit strings in CDF files to astropy unit objects for the following instruments: PSP/ISOIS, SOHO/CELIAS, SOHO/COSTEP-EPHIN, and SOHO/ERNE. (#6159) * Add an environment variable SUNPY_NO_BUILD_ANA_EXTENSION which when present will cause sunpy to not compile the ANA C extension when building from source. (#6166) * sunpy now uses the Limited Python API. Therefore, one binary distribution (wheel) per platform is now published and it is compatible with all Python versions sunpy supports. (#6171) - Replace sunpy-test-ignore-warnings.patch by sunpy-obs-profile.patch and sunpy-scikit-image-deprecation.patch ------------------------------------------------------------------- Wed Jun 8 21:01:43 UTC 2022 - Ben Greiner <code@bnavigator.de> - Update to v4.0.0 * When rotating images using the SciPy rotation method, the default behavior is now to clip the output range to the input range, which matches the default behavior of the scikit-image rotation method. (#5867) * Any NaNs are now preserved by sunpy.image.transform.affine_transform and sunpy.map.GenericMap.rotate. (#5867) * sunpy.image.transform.affine_transform and sunpy.map.GenericMap.rotate now default to using SciPy for rotation instead of scikit-image, so rotation results may be slightly different. (#5867) * The math convenience methods of sunpy.map.GenericMap - ~sunpy.map.GenericMap.max, ~sunpy.map.GenericMap.mean, ~sunpy.map.GenericMap.min, and , ~sunpy.map.GenericMap.std - now ignore NaNs in the image data. (#5867) * sunpy.image.transform.affine_transform and sunpy.map.GenericMap.rotate now default to using NaN instead of zero for the missing value, the value used for pixels in the output array that have no corresponding pixel in the input array. To obtain the previous behavior, missing should be explicitly specified as zero. (#5867) * The .JSOCClient and every sunpy.net.dataretriever.GenericClient was passing all **kwargs to parfive.Downloader.enqueue_file, this was unintended and has been removed. (#6052) * Changed the default interpolation order for sunpy.map.GenericMap.rotate from 4 to 3, with the precise meaning of these interpolation orders depending on the selected rotation method. For the default rotation method, which uses scipy.ndimage.affine_transform, this changes the default interpolation from biquartic to bicubic, which reduces the computation time without reducing the quality of the output below what a typical user needs. (#6089) * Deprecate sunpy.image.coalignment as the code has now been moved to sunkit_image.coalignment with an identical API. This module will be removed in sunpy 4.1. (#5957) * The sunpy.map.GenericMap.shift method has been renamed to sunpy.map.GenericMap.shift_reference_coord and ~sunpy.map.GenericMap.shift has been deprecated. (#5977) * The sunpy.map.GenericMap.shifted_value property has been deprecated. Modifications to the reference coordinate can be found in the CRVAL1 and CRVAL2 keys of sunpy.map.GenericMap.meta.modified_items. (#5977) * The sunpy.io.fits module is deprecated, as it was designed for internal use only. Use the astropy.io.fits module instead for more generic functionality to read FITS files. (#5983) * sunpy.physics.solar_rotation.mapsequence_solar_derotate is deprecated and will be removed in version 4.1. This function has been moved to sunkit_image.coalignment.mapsequence_coalign_by_rotation and has an identical API and functionality. (#6031) * sunpy.physics.solar_rotation.calculate_solar_rotate_shift is deprecated and will be removed in version 4.1. This function has been moved to sunkit_image.coalignment.calculate_solar_rotate_shift and has an identical API and functionality. (#6031) * Added support for Python 3.10 (#5568) * Added support for "%Y.%m.%d_%H:%M:%S_UTC" and "%Y.%m.%d_%H:%M:%S" time formats in sunpy.time.parse_time. (#5647) * The rsun argument to ~sunpy.map.get_observer_meta is now optional. (#5655) * Added the ~sunpy.net.base_client.QueryResponseTable.total_size, which estimates the total size of the results from a Fido query. If this is supported by a client, the total size is printed alongside the results. * To add support for this in external clients, make sure one column contains the individual filesizes as ~astropy.units.Quantity, and set the size_column class attribute to the name of this column. (#5659) * Added the ability to specify the use of Carrington coordinates with sunpy.map.GenericMap.draw_grid. (#5703) * Printing a .MetaDict will now show each entry on a new line. (#5765) * Removed support for Python 3.7. (#5773) * The 'event_endtime', 'event_starttime' and 'event_peaktime' columns in a HEK query are now returned as ~astropy.time.Time objects. Previously they were timestamp strings. (#5806) * Added a helpful warning message when converting a 2D Helioprojective coordinate will return all NaNs. (#5817) * The colorbar limits on HMI magnetic field maps are now automatically set to be symmetric about zero. (#5825) * Added a clip keyword to sunpy.image.transform.affine_transform and sunpy.map.GenericMap.rotate to enable or disable whether the range of the output image is clipped to the range of the input range. (#5867) * Created the decorator sunpy.image.transform.add_rotation_function for registering new rotation functions for use by sunpy.image.transform.affine_transform and sunpy.map.GenericMap.rotate. (#5867) * sunpy.image.transform.affine_transform and sunpy.map.GenericMap.rotate have both had their use_scipy arguments deprecated. Instead use the new method argument to select from the available rotation methods. (#5916) * Added a Maxwell unit and any places where a conversion to Gauss occurs has been removed. (#5998) * Add a basic HTML representation for ~sunpy.timeseries.TimeSeries. (#6032) * The minimum supported asdf version has been increased to 2.8.0 to allow future compatibility with the breaking changes planned for asdf 3.0. In addtion to this the asdf-astropy package is now required to serialise and deserialise the sunpy coordinate frame classes to ASDF. (#6057) * Added the option to rotate using OpenCV when using sunpy.image.transform.affine_transform or sunpy.map.GenericMap.rotate by specifying method='cv2'. The OpenCV Python package must be installed on the system. (#6089) * Fixed reading CDF files when a column has no entries. If this is the case the column will be ignored, and a message logged at DEBUG level. (#5664) * Fixed the units of sunpy.map.sources.HMISynopticMap.scale and sunpy.map.sources.MDISynopticMap.scale. (#5682) * Fixed a bug where custom values in the plot_settings dictionary were not being propagated to new map instances created when calling map methods (e.g. .submap). (#5687) * Added automatic conversion of some common but non-standard unit strings in CDF files to astropy unit objects. If sunpy does not recognise the unit string for a particular column, units of u.dimensionless_unscaled are applied to that column and a warning raised. * If you think a given unit should not be dimensionless and support should be added for it in sunpy, please raise an issue at https://github.com/sunpy/sunpy/issues. (#5692) * The default id_type in sunpy.coordinates.get_horizons_coord is now None to match the deafult id_type in astroquery 0.4.4, which will search major bodies first, and if no major bodies are found, then search small bodies. For older versions of astroquery the default id_type used by ~sunpy.coordinates.get_horizons_coord is still 'majorbody'. (#5707) * In consultation with JSOC, we now limit all JSOC downloads to one connection. This will override all connection user settings passed to the downloader. (#5714) * Updated the plot methods on some timeseries classes to correctly label and format the time axis. (#5720) * Fixed a long-standing bug where our logger could intercept Astropy warnings in addition to SunPy warnings, and thus could conflict with Astropy's logger. (#5722) * Update asdf schemas so that references use URIs not tags as this is not supported by the new asdf extensions API. (#5723) * Increased the default maximum amount of records returned from HEC to 500 from 10. If the maximum number of records are returned, a message is shown. (#5738) * Reading a series of CDF files where at least one of them is empty no longer raises an error. A message for each empty file is logged at the DEBUG level. (#5751) * sunpy.map.make_fitswcs_header now includes a PC_ij matrix in the returned header if no rotation is specified. (#5763) * In the case where a map header has no PC_ij values, CROTA2 != 0, and CDELT1 != CDELT2, the calculation of the map rotation matrix has been fixed. This bug only affected maps with non-zero rotation, no PC matrix in the header, and un-equal scales along the two image axes. (#5766) * Maps created from ~sunpy.map.GenericMap.resample and ~sunpy.map.GenericMap.superpixel have been fixed in the case where the resampling was not square, and the PCi_j matrix (often a rotation matrix) was not a multiple of the identity matrix. When the PCi_j or CDi_j formalisms are used in the metadata these are now correctly modified, and the CDELT values are left unchanged. (#5786) * The __repr__ of several sunpy.database classes have been updated to remove angular brackets and add equals signs. As an example, '<DatabaseEntry(id 3)>' has changed to 'DatabaseEntry(id=3)' (#5790) * Fixed a bug when rotating a map by a matrix that is not purely a rotation. The likely way to inadvertently encounter this bug was when de-rotating a map with rectangular pixels that were not aligned with the coordinate axes. (#5803) * Fixed a bug where rotating a map while simultaneously scaling it could result in some of the map data being cropped out. (#5803) * Symmetric colorbar limits are no longer set on intensity images from MDI. (#5825) * Fixed plotting and peeking NORH timeseries data with pandas 1.4.0. (#5830) * In the case where sunpy.database.Database.fetch() successfully downloads only some of the search results, a ~sunpy.database.PartialFetchError is raised. This fixes a bug where the successful downloads would have been added to the database, but sometimes with incorrect metadata. (#5835) * When getting IRIS files from the VSO, Fido was incorrectly labelling them as XML files. (#5868) * ~sunpy.map.sources.HMIMap now looks for 'INSTRUME' instead of 'TELESCOP' in order to support Helioviewer JPEG2000 versions of HMI data which do not preserve the 'TELESCOP' keyword as expected in the JSOC standard. (#5886) * Fixes a bug where the cmap and norm keyword arguments were ignored when calling ~sunpy.map.MapSequence.plot. (#5889) * Fix parsing of the GOES/XRS netcdf files to ignore leap seconds. (#5915) * Fixed compatability with h5netcdf>0.14 when loading GOES netcdf files. (#5920) * Fixed bugs with the rebinning and per-keV calculation for Fermi/GBM summary lightcurves (~sunpy.timeseries.sources.GBMSummaryTimeSeries). (#5943) * Fixed the unintentionally slow parsing of Fermi/GBM files (~sunpy.timeseries.sources.GBMSummaryTimeSeries). (#5943) * Fixes a bug in ~sunpy.map.sources.SJIMap where undefined variable was used when parsing the wavelength. Also fixes the unit parsing by removing the "corrected" string from the BUNIT keyword as "corrected DN" cannot be parsed as a valid FITS unit. (#5968) * Fixed unit handling issue with .GenericMap and lowercasing the unit before it submits it to astropy.units. (#5970) * Fixed reading CDF files when a variable has more than 2 dimensions. If this is the case the variable will be ignored, and a user warning is provided. (#5975) * Fixed sunpy.system_info so it returns the extra group when an optional dependency is missing. (#6011) * Relax condition check for a HMI Synoptic map source. (#6018) * .VSOClient was not passing **kwargs through each download method. (#6052) * Fixed the inability to rotate images and maps with byte ordering that is different from the native byte order of the system (e.g., big-endian values on a little-endian system) for certain interpolation orders when internally using scikit-image. (#6064) * Fixed a crash for dask arrays when displaying the ~sunpy.map.GenericMap html representation. (#6088) * Constructing the color map name for a ~sunpy.map.sources.KCorMap no longer requires the "detector" key in the metadata. This allows for reading files that are missing this keyword, as in the KCor JPEG2000 files. (#6112) * We now correctly pass keyword arguments in our internal FITS reader to astropy.io.fits.open. (#6123) - Refresh sunpy-test-ignore-warnings.patch - Re-enable python310: re-enabled zeep because xmlsec is optional. ------------------------------------------------------------------- Sat May 21 09:36:16 UTC 2022 - Matej Cepl <mcepl@suse.com> - Doesn't build with 3.10 because of missing xmlsec. ------------------------------------------------------------------- Tue Apr 26 10:33:52 UTC 2022 - Ben Greiner <code@bnavigator.de> - Update sunpy-test-ignore-warnings.patch to include warnings filter for Pillow 10 -- gh#sunpy/sunpy#6022 ------------------------------------------------------------------- Tue Apr 5 10:11:48 UTC 2022 - Ben Greiner <code@bnavigator.de> - Add sunpy-test-ignore-warnings.patch * Ignore Python 3.10 distutils usage * Add hypothesis profile for slow obs test suite executions * Ignore leap second warnings for reproducible tests gh#sunpy/sunpy#6030 ------------------------------------------------------------------- Sat Apr 2 21:01:29 UTC 2022 - Ben Greiner <code@bnavigator.de> - Update to 3.1.5 * Maps created from ~sunpy.map.GenericMap.resample and ~sunpy.map.GenericMap.superpixel have been fixed in the case where the resampling was not square, and the PCi_j matrix (often a rotation matrix) was not a multiple of the identity matrix. When the PCi_j or CDi_j formalisms are used in the metadata these are now correctly modified, and the CDELT values are left unchanged. (#5786) * When getting IRIS files from the VSO, Fido was incorrectly labelling them as XML files. (#5868) * Fixes a bug where the cmap and norm keyword arguments were ignored when calling ~sunpy.map.MapSequence.plot. (#5889) Fix parsing of the GOES/XRS netcdf files to ignore leap seconds. (#5915) * Fixed compatability with h5netcdf>0.14 when loading GOES netcdf files. (#5920) * Fixes a bug in ~sunpy.map.sources.IRISMap where undefined variable was used when parsing the wavelength. Also fixes the unit parsing by removing the "corrected" string from the BUNIT keyword as "corrected DN" cannot be parsed as a valid FITS unit. (#5968) * Fixed unit handling issue with .GenericMap and lowercasing the unit before it submits it to astropy.units. (#5970) - Release 3.1.4 * Fixed plotting and peeking NORH timeseries data with pandas 1.4.0. (#5830) * In the case where sunpy.database.Database.fetch() successfully downloads only some of the search results, a ~sunpy.database.PartialFetchError is raised. This fixes a bug where the successful downloads would have been added to the database, but sometimes with incorrect metadata. (#5835) * HMIMap now looks for 'INSTRUME' instead of 'TELESCOP' in order to support Helioviewer JPEG2000 versions of HMI data which do not preserve the 'TELESCOP' keyword as expected in the JSOC standard. (#5886) - Reenable dask for python310 test suite - Drop sunpy-pr5830-pandas140.patch ------------------------------------------------------------------- Sat Feb 5 22:37:06 UTC 2022 - Ben Greiner <code@bnavigator.de> - Update to 3.1.3 * Big changelog since 3.0.1 * Adds support for Python 3.10 * Breaking API changes and removals documented in release notes: https://github.com/sunpy/sunpy/releases - Add sunpy-pr5830-pandas140.patch -- gh#sunpy/sunpy#5830 ------------------------------------------------------------------- Thu Aug 5 18:36:08 UTC 2021 - Ben Greiner <code@bnavigator.de> - Update to 3.0.1 Big changelog since 2.1.4 ------------------------------------------------------------------- Fri Apr 9 13:05:52 UTC 2021 - Ben Greiner <code@bnavigator.de> - Update to 2.1.4 Big changelog since 2.0.7: https://github.com/sunpy/sunpy/releases Backwards incompatible changes in 2.1.0: * Support for Python 3.6 and Numpy 1.15 has been dropped in line with NEP 29. The minimum supported version of Astropy is now 4. 0, and the minimum version of scipy is now 1.2. (#4284) * Changed sunpy.coordinates.sun.B0 return type from ~astropy. coordinates.Angle to ~astropy.coordinates.Latitude. (#4323) * An error is now raised if vmin or vmax are passed to to sunpy. map.GenericMap.plot and they are already set on the map norm. This is consistent with upcoming Matplotlib changes. (#4328) * Previously slicing the result of Fido.search() (a ~sunpy.net. fido_factory.UnifiedResponse object) so that it had a length of one returned another ~sunpy.net.fido_factory. UnifiedResponse object. Now it will return a ~sunpy.net. base_client.QueryResponseTable object, which is a subclass of astropy.table.Table. (#4358) * The .size property of a coordinate frame with no associated data will now raise an error instead of returning 0. (#4577) * The following ~sunpy.map.Map methods have had support for specific positional arguments removed. They must now be passed as keyword arguments (i.e. m.method(keyword_arg=value)). * ~sunpy.map.GenericMap.submap: width, height. ~sunpy.map.GenericMap.draw_rectangle: width, height, axes, top_right. (#4616) * The sunpy specific attributes .heliographic_observer and .rsun are no longer set on the ~astropy.wcs.WCS returned by sunpy. map.GenericMap.wcs. (#4620) * Due to upstream changes, the parsing logic for the ~sunpy.net. helio.HECClient now returns strings and not bytes for ~sunpy. net.helio.HECClient.get_table_names. (#4643) * Reduced the selection of dependent packages installed by default via pip, which means that some of our sub-packages will not fully import when sunpy is installed with pip install sunpy. You can install all dependencies by specifying pip install sunpy[all], or you can install sub-package-specific dependencies by specifying, e.g., [map] or [timeseries]. (#4662) * The class inheritance for ~sunpy.coordinates.metaframes. RotatedSunFrame and the frames it creates has been changed in order to stop depending on unsupported behavior in the underlying machinery. The return values for some isinstance/ issubclass calls will be different, but the API for ~sunpy. coordinates.metaframes.RotatedSunFrame is otherwise unchanged. (#4691) * Fix a bug in ~sunpy.map.GenericMap.submap where only the top right and bottom left coordinates of the input rectangle in world coordinates were considered when calculating the pixel bounding box. All four corners are once again taken into account now, meaning that ~sunpy.map.GenericMap.submap correctly returns the smallest pixel box which contains all four corners of the input rectangle. * To revert to the previous 2.0.0 behaviour, first convert the top right and bottom left coordinates to pixel space before calling submap with: top_right = smap.wcs.world_to_pixel(top_right) * u.pix bottom_left = smap.wcs.world_to_pixel(bottom_left) * u.pix smap.submap(bottom_left=bottom_left, top_right=top_right) This will define the rectangle in pixel space. (#4727) * VSO results where the size was -1 (missing data) now return None rather than -1 to be consistent with other missing data in the VSO results. (#4798) * All result objects contained within the results of a Fido. search() (a ~sunpy.net.fido_factory.UnifiedResponse object) are now ~sunpy.net.base_client.QueryResponseTable objects (or subclasses thereof). These objects are subclasses of astropy. table.Table and can therefore be filtered and inspected as tabular objects, and the modified tables can be passed to Fido. fetch. * This, while a breaking change for anyone accessing these response objects directly, will hopefully make working with Fido search results much easier. (#4798) * Results from the ~sunpy.net.dataretriever.NOAAIndicesClient and the ~sunpy.net.dataretriever.NOAAPredictClient no longer has Start Time or End Time in their results table as the results returned from the client are not dependant upon the time parameter of a search. (#4798) * The sunpy.net.vso.QueryResponse.search method has been removed as it has not worked since the 1.0 release of sunpy. (#4798) * The sunpy.net.hek.hek.HEKColumn class has been removed, the HEKTable class now uses the standard astropy.table.Column class. (#4798) * The keys used to format file paths in Fido.fetch have changed. They are now more standardised across all the clients, as they are all extracted from the names of the columns in the results table. * For results from the VSO the keys are no longer separated with ., and are based on the displayed column names. For results from the dataretriever clients the only main change is that the keys are now lower case, where they were capitilized before. You can use the ~.sunpy.net.fido_factory. UnifiedResponse.path_format_keys method to see all the possible keys for a particular search. (#4798) * The time returned from ~sunpy.coordinates.sun.carrington_rotation_number has been changed from the TT scale to the more common UTC scale. To undo this change, use time_out = time_out.tt on the outputted time. (#4819) * .BaseQueryResponse.response_block_properties has been renamed to .BaseQueryResponse.path_format_keys, on the return objects from all search() methods on all clients and from Fido.search() (#4798) ------------------------------------------------------------------- Sat Jan 23 10:38:14 UTC 2021 - Benjamin Greiner <code@bnavigator.de> - Update to 2.0.7 + Big changlog since 1.1.0. See https://docs.sunpy.org/en/stable/whatsnew/2.0.html https://github.com/sunpy/sunpy/blob/master/CHANGELOG.rst and https://github.com/sunpy/sunpy/releases + Highlights from the 2.0 update: * sunpy.net.Fido now supports tab completion of search attributes. This allows you to do a.Instrument.AIA, and print a.Instrument to see the list of known supported instruments. * sunpy.instr.aia.aiaprep has been deprecated in favor of the functionality in the aiapy <https://aiapy.readthedocs.io/>__ package. * Various fixes and clarifications to pixel indexing in the sunpy.map subpackage. * Standardization of specifying rectangles in coordinate space in the :meth:~sunpy.map.GenericMap.submap and :meth:~sunpy.map.GenericMap.draw_rectangle methods of ~sunpy.map.GenericMap. * HTML quicklook previews of ~sunpy.map.GenericMap and ~sunpy.map.MapSequence instances are available with the new :meth:~sunpy.map.GenericMap.quicklook and :meth:~sunpy.map.MapSequence.quicklook methods, respectively. This is also the default display in Jupyter <https://jupyter.org/>__ notebooks. * Integration of differential rotation into the sunpy.coordinates framework. This enables, amongst other things, the warping of images with the reproject <https://reproject.readthedocs.io/>__ package and the plotting of rotated grid lines with :ref:WCSAxes <astropy:wcsaxes>. - Drop fix_importlib_py_ver.patch merged upstream ------------------------------------------------------------------- Mon Apr 20 09:09:35 UTC 2020 - Tomáš Chvátal <tchvatal@suse.com> - Remove python2 dependencies - Do not condition importlib_resources, namespace is provided by our interpreter to allow compat ------------------------------------------------------------------- Wed Jan 29 18:49:45 UTC 2020 - Todd R <toddrme2178@gmail.com> - Update to version 1.1.0 + Backwards Incompatible Changes * The `sunpy.net.vso.vso.get_online_vso_url` function has been broken into two components, the new `sunpy.net.vso.vso.get_online_vso_url` function takes no arguments (it used to take three) and now only returns an online VSO mirror or None. The construction of a `zeep.Client` object is now handled by `sunpy.net.vso.vso.build_client` which has a more flexible API for customising the `zeep.Client` interface. * Importing `sunpy.timeseries.timeseriesbase` no longer automatically imports Matplotlib. * `NOAAIndicesTimeSeries.peek` now checks that the `type` argument is a valid string, and raises a `ValueError` if it isn't. * Observer-based coordinate frames (`~sunpy.coordinates.frames.Heliocentric` and `~sunpy.coordinates.frames.Helioprojective`) no longer assume a default observer (Earth) if no observer is specified. These frames can now be used with no observer specified, but most transformations cannot be performed for such frames. This removal of a default observer only affects `sunpy.coordinates`, and has no impact on the default observer in `sunpy.map`. * The callback functions provided to `~sunpy.visualization.animator.BaseFuncAnimator` ``button_func`` keyword argument now take two positional arguments rather than one. The function signature is now ``(animator, event)`` where the first arg is the animator object, and the second is the matplotlib mouse event. * The colormap stored in SunPy's Map subclasses (ie. ``map.plot_settings['cmap']``) can now be colormap string instead of the full `matplotlib.colormap.Colormap` object. To get the full `Colormap` object use the new attribute ``map.cmap``. * Fix a warning in `sunpy.map.GenericMap.rotate` where the truth value of an array was being calculated. This changes the behaviour of `~sunpy.map.GenericMap.rotate` when the ``angle=`` parameter is not an `~astropy.units.Quantity` object to raise `TypeError` rather than `ValueError`. + Deprecations and Removals * Removed the step of reparing images (replacing non-finite entries with local mean) before coaligning them. The user is expected to do this themselves before coaligning images. If NaNs/non-finite entries are present, a warning is thrown. The function `sunpy.image.coalignment.repair_image_nonfinite` is deprecated. * The method to convert a `~sunpy.coordinates.frames.Helioprojective` frame from 2D to 3D has been renamed from `~sunpy.coordinates.frames.Helioprojective.calculate_distance` to `~sunpy.coordinates.frames.Helioprojective.make_3d`. This method is not typically directly called by users. * `sunpy.visualization.animator.ImageAnimatorWCS` is now deprecated in favour of `~sunpy.visualization.animator.ArrayAnimatorWCS`. * ``sunpy.cm`` has been moved to `sunpy.visualization.colormaps` and will be removed in a future version. + Features * Add a new `sunpy.data.manager` and `sunpy.data.cache` for dealing with versioned remote data within functions. Please see the `Remote Data Manager <https://docs.sunpy.org/en/latest/dev_guide/remote_data.html>`__ guide. * Added the coordinate frames `~sunpy.coordinates.frames.HeliocentricEarthEcliptic` (HEE), `~sunpy.coordinates.frames.GeocentricSolarEcliptic` (GSE), `~sunpy.coordinates.frames.HeliocentricInertial` (HCI), and `~sunpy.coordinates.frames.GeocentricEarthEquatorial` (GEI). * Added SunPy Map support for GOES SUVI images. * - Support APE14 for ``ImageAnimatorWCS`` in SunPy's visualization module * Add ability to disable progressbars when dowloading files using `sunpy.net.helioviewer.py` and edited docstrings to mention this feature. * Adds support for searching and downloading SUVI data. * Log all VSO XML requests and responses to the SunPy logger at the ``DEBUG`` level. * Transformations between frames in `sunpy.coordinates` can now provide detailed debugging output. Set the `logging` level to ``DEBUG`` to enable this output. * Added the `sunpy.coordinates.sun.carrington_rotation_time` function to compute the time of a given Carrington rotation number. * A new method has been added to remove columns from a `sunpy.timeseries.GenericTimeSeries`. * Add `shape` property to TimeSeries. * Added ASDF schemas for the new coordinate frames (`~sunpy.coordinates.frames.GeocentricEarthEquatorial`, `~sunpy.coordinates.frames.GeocentricSolarEcliptic`, `~sunpy.coordinates.frames.HeliocentricEarthEcliptic`, `~sunpy.coordinates.frames.HeliocentricInertial`). See the gallery for an example of using `asdf` to save and load a coordinate frame. * `sunpy.visualization.animator.ArrayAnimatorWCS` was added which uses the WCS object to get the coordinates of all axes, including the slider labels. It also provides the ability to customise the plot by specifying arguments to `~astropy.visualization.wcsaxes.WCSAxes` methods and supports animation of WCS aware line plots with Astroy 4.0. * The returned list of `~sunpy.map.Map` objects is now sorted by filename when passing a directory or glob pattern to `~sunpy.map.MapFactory`. * Single character wildcards and character ranges can now be passed as glob patterns to `~sunpy.map.Map`. * `~sunpy.map.Map` now accepts filenames and directories as `pathlib.Path` objects. * `~sunpy.map.GenericMap` objects now have a ``.cmap`` attribute, which returns the full `~matplotlib.colormap.Colormap`. object. * `sunpy.io.write_file()` now accepts `~pathlib.Path` objects as filename inputs. * `sunpy.map.make_fitswcs_header` now accepts a `tuple` representing the shape of an array as well as the actual array as the ``data`` argument. * Made a couple of module imports lazy to reduce the import time of sunpy.map by ~40%. * `sunpy.map.GenericMap.wcs` now uses the full FITS header to construct the WCS. This adds support for instruments with more complex projections, such as WISPR, however does mean that Map will be more sensitive to incorrect or invalid FITS headers. If you are using custom headers with SunPy Map you might encounter issues relating to this change. * `sunpy.visualization.animator.BaseFuncAnimator` now takes an optional ``slider_labels`` keyword argument which draws text labels in the center of the sliders. * Added a more helpful error message when trying to load a file or directory that doesn't exist with `Map`. * Add ``__repr__`` for `~sunpy.map.MapSequence` objects so that users can view the critical information of all the ``Map`` objects, in a concise manner. + Bug Fixes * Fixed accuracy issues with the calculations of Carrington longitude (`~sunpy.coordinates.sun.L0`) and Carrington rotation number (`~sunpy.coordinates.sun.carrington_rotation_number`). * Updated `sunpy.map.header_helper.make_fitswcs_header` to be more strict on the inputs it accepts. * Fix the calculation of ``rsun_ref`` in `~sunpy.map.make_fitswcs_header` and and ensure that the default reference pixel is indexed from 1. * Fixed the missing transformation between two `~sunpy.coordinates.HeliographicCarrington` frames with different observation times. * `sunpy.map.sources.AIAMap` and `sunpy.map.sources.HMIMap` will no longer assume the existance of certain header keys. * `sunpy.map.make_fitswcs_header` now supports specifying the map projection rather than defaulting to ``TAN``. * Fix the behaviour of `sunpy.coordinates.frames.Helioprojective.calculate_distance` if the representation isn't Spherical. * Fixed a bug where the longitude of a coordinate would not wrap at the expected angle following a frame transformation. * Fixed a bug where passing a time or time interval to the differential rotation function threw an error because the new observer was not in HGS. * Fixed bug where `~sunpy.coordinates.ephemeris.get_horizons_coord` was unable to accept `~astropy.time.Time` arrays as input. * Fix the ticks on the default heliographic grid overlay so they are not white (and normally invisible) by default. * Fixed a bug with `sunpy.net.hek.HEKClient` when the results returned were a mixed dataset. * Fix `sunpy.physics.differential_rotation.differential_rotate` to rotate in the correct direction and to account for the rotation of the heliographic coordinate frame with time. * Fixed a bug with the handling of changing observation times for transformations between `~astropy.coordinates.HCRS` and `~sunpy.coordinates.frames.HeliographicStonyhurst`, which also indirectly affected other transformations when changing observation times. * Fixed all coordinate transformations to properly handle a change in observation time. * Fixed the handling of coordinates with velocity information when transforming between Astropy frames and SunPy frames. * Fixed `~sunpy.physics.solar_rotation.calculate_solar_rotate_shift` so that it does not calculate a shift between the reference layer and itself, which would sometimes incorrectly result in a shift of a pixel due to numerical precision. * Stop crash when ``LineAnimator`` ``axes_ranges`` entry given as ``1D`` array when data is ``>1D``, i.e. as an independent axis. * Fixed a `sunpy.coordinates` bug where a frame using the default observer of Earth could have its observer overwritten during a transformation. * Fixed a bug where the transformation from `~sunpy.coordinates.frames.Helioprojective` to `~sunpy.coordinates.frames.Heliocentric` used the Sun-observer distance from the wrong frame when shifting the origin, and thus might not give the correct answer if the observer was not the same for the two frames. * Fixed a bug with the transformations between `~sunpy.coordinates.frames.Heliocentric` and `~sunpy.coordinates.frames.HeliographicStonyhurst` when the frame observation time was not the same as the observer observation time. The most common way to encounter this bug was when transforming from `~sunpy.coordinates.frames.Helioprojective` to any non-observer-based frame while also changing the observation time. * VSO client `fetch` should not download when `wait` keyword argument is specified. * Fixed a bug with `~sunpy.coordinates.wcs_utils.solar_frame_to_wcs_mapping` that assumed that the supplied frame was a SunPy frame. * Fixed bugs with `~sunpy.coordinates.wcs_utils.solar_frame_to_wcs_mapping` if the input frame does not include an observation time or an observer. * `~sunpy.coordinates.utils.GreatArc` now accounts for the start and end points of the arc having different observers. * Fixed situations where 2D coordinates provided to `~sunpy.coordinates.frames.HeliographicStonyhurst` and `~sunpy.coordinates.frames.HeliographicCarrington` were not converted to 3D as intended. Furthermore, the stored data will always be the post-conversion, 3D version. * Fix off by one error in `sunpy.map.make_fitswcs_header` where when using the default ``reference_pixel=None`` keyword argument the pixel coordinate of the reference pixel was off by +1. * Updated both GOES XRS and LYRA dataretriever clients to use `~sunpy.util.scraper.Scraper`, to make sure that files are actually on the servers being queried. * Fixing the ordering of lon and lat inputs into make_fitswcs_header * Updated the URL for Fermi spacecraft-pointing files to use an HTTPS connection to HEASARC. * Fixed a bug where permission denied errors when downloading files are very verbose by adding an error message in `~sunpy.net.fido_factory.UnifiedDownloaderFactory.fetch`. * Fixed a malformed call to `astropy.time.Time` in a test, which resulted in an incorrect time scale (UTC instead of TT). * Fix incorrect files being included in the tarball, and docs missing from the tarball * Fixed a bug where clipping behavior had been enabled by default in the plotting normalizers for ``Map`` objects. Clipping needs to be disabled to make use of the over/under/masked colors in the colormap. * Fix a bug with observer based frames that prevented a coordinate with an array of obstimes being transformed to other frames. * `sunpy.map.GenericMap` will no longer raise a warning if the posisition of the observer is not known for frames that don't need an observer, i.e. heliographic frames. * Apply `os.path.expanduser` to `sunpy.map.MapFactory` input before passing to `glob.glob` * Fix multiple instances of `sunpy.map.sources` assuming the type of FITS Header values. * Fixed a bug with `~sunpy.coordinates.NorthOffsetFrame` where non-spherical representations for the north pole produced an error. * Fixed ``map.__repr__`` when the coordinate system information contained in the ``CUNIT1/2`` metadata is not set to a known value. * Fixed bugs with some coordinate transformations when ``obstime`` is ``None`` on the destination frame but can be assumed to be the same as the ``obstime`` of the source frame. * Updated `sunpy.map.mapsequence.MapSequence` so that calling ``_derotate()`` raises ``NotImplementedError``. Added associated tests. * Fixed pandas plotting registration in `sunpy.timeseries`. * Correctly catch and emit a warning when converting a map metadata to a FITS header and it contains a keyword with non-ascii characters. + Improved Documentation * Clean up the docstring for `sunpy.physics.differential_rotation.solar_rotate_coordinate` to make the example clearer. * Added new gallery examples and cleaned up various gallery examples. * Cleaned and expanded upon the docstrings for each Fido Client. * Added clarifying hyperlinks to the gallery example `getting_lasco_observer_location` to link to `astroquery` docs page. * Added more details to docstrings in `sunpy.coordinates.frames`. * Added a link to package maintainer list in the API Stability page. * Improved the contributing guide by updating commands and highlighting text. * Removing `.fits` from the end of path kwargs in `sunpy.net.FIDO.fetch` docs to change output file extension from `{file}.fits.fits` to `{file}.fits`. * A new example gallery section "Using SunPy with Other Packages" has been added, which contains a set of new examples using the `reproject <https://reproject.readthedocs.io/>`__ with solar data. * Added a table of supported coordinate systems and other miscellaneous improvements to the :ref:`coordinates documentation <sunpy-coordinates>`. * Clarified the meaning of :attr:`GenericMap.dsun`. * Fixed the plots with multiple subplots in the ``Map`` user guide to properly use `~astropy.visualization.wcsaxes` and to be appropriately sized. * Fixed various issues with the gallery example of saving/loading coordinates using `asdf`. * Added ``sunpy.__citation__`` with a BibTex entry for citing sunpy. * Added an example showing how to display two maps and fade between them. * Clarified the meaning of some `GenericMap` observer properties. * Added inherited members of `sunpy.map` classes to the docs. * Fixed documentation of `sunpy.database.Database.search` by adding ``Returns`` docstring. * Updated the docstring for the parameter ``sortby`` in `~sunpy.map.MapSequence` with the default value, valid value and how to disable sorting. * Updated the tour guide to reflect that the time series is not random data. * Fixes bold type and extra line breaks of remote data manager example in `remote_data_manager.py`. + Trivial/Internal Changes * Allow running our sphinx-gallery examples as Jupyter notebooks via Binder * Improve error messages and type checking in `sunpy.visualization.animator.image.ImageAnimatorWCS`. * Copy the library `distro` into `sunpy/extern`: replaces the deprecated `platform/linux_distribution` * The version of Matplotlib used to generate figure tests has been bumped from 3.0.3 to 3.1.1. * Corrected spelling of 'plotting' in timeseries method (changed 'ploting' to 'plotting'). * Switched to "importlib_metadata" to get package version to speed up import of SunPy. * Fix tests for `sunpy.data.data_manager` and ensure they are correctly executed with pytest. - Add fix_importlib_py_ver.patch Fixes a dependency that is not required for later python versions. See https://github.com/sunpy/sunpy/pull/3683 ------------------------------------------------------------------- Wed Nov 27 16:02:34 UTC 2019 - Todd R <toddrme2178@gmail.com> - Update to version 1.0.6 + Bug Fixes * ~sunpy.coordinates.utils.GreatArc now accounts for the start and end points of the arc having different observers. * Single character wildcards and character ranges can now be passed as glob patterns to ~sunpy.map.Map. * The returned list of ~sunpy.map.Map objects is now sorted by filename when passing a directory or glob pattern to ~sunpy.map.MapFactory. * Fixed a bug where clipping behavior had been enabled by default in the plotting normalizers for Map objects. Clipping needs to be disabled to make use of the over/under/masked colors in the colormap. * Fix a bug with observer based frames that prevented a coordinate with an array of obstimes being transformed to other frames. sunpy.map.GenericMap will no longer raise a warning if the posisition of the observer is not known for frames that don't need an observer, i.e. heliographic frames. * Apply os.path.expanduser to sunpy.map.MapFactory input before passing to glob.glob * Fix multiple instances of sunpy.map.sources assuming the type of FITS Header values. + Improved Documentation * Clarified the meaning of GenericMap.dsun. * Updated the user guide for Map to use clip_interval. * Updated the Venus-transit gallery to use the VSO so that it has correct pointing information in the header. * Fixed various issues with the gallery example of saving/loading coordinates using asdf. * Added sunpy.__citation__ with a BibTex entry for citing sunpy. * Added an example showing how to display two maps and fade between them. + Trivial/Internal Changes * Copy the library distro into `sunpy/extern`: replaces the deprecated platform/linux_distribution * Corrected spelling of 'plotting' in timeseries method (changed 'ploting' to 'plotting'). + SunPy v1.0.5 + Bug Fixes * Fix incorrect files being included in the tarball, and docs missing from the tarball + SunPy v1.0.4 + Bug Fixes * Fixed situations where 2D coordinates provided to sunpy.coordinates.frames.HeliographicStonyhurst and sunpy.coordinates.frames.HeliographicCarrington were not converted to 3D as intended. Furthermore, the stored data will always be the post-conversion, 3D version. * Fix off by one error in sunpy.map.make_fitswcs_header where when using the default reference_pixel=None keyword argument the pixel coordinate of the reference pixel was off by +1. * Fixing the ordering of lon and lat inputs into sunpy.map.make_fitswcs_header * Updated the URL for Fermi spacecraft-pointing files to use an HTTPS connection to HEASARC. + Improved Documentation * Improved the contributing guide by updating commands and highlighting text. * Removing .fits from the end of path kwargs in sunpy.net.FIDO.fetch docs to change output file extension from {file}.fits.fits to {file}.fits. - Update to version 1.0.3 + Features * Add ability to disable progressbars when dowloading files using sunpy.net.helioviewer.py and edited docstrings to mention this feature. + Bug Fixes * Fixed the handling of coordinates with velocity information when transforming between Astropy frames and SunPy frames. * Fixed all coordinate transformations to properly handle a change in observation time. * Fixed ~sunpy.physics.solar_rotation.calculate_solar_rotate_shift so that it does not calculate a shift between the reference layer and itself, which would sometimes incorrectly result in a shift of a pixel due to numerical precision. * Stop crash when LineAnimator axes_ranges entry given as 1D array when data is >1D, i.e. as an independent axis. * Fixed a bug where the transformation from ~sunpy.coordinates.frames.Helioprojective to ~sunpy.coordinates.frames.Heliocentric used the Sun-observer distance from the wrong frame when shifting the origin, and thus might not give the correct answer if the observer was not the same for the two frames. * Fixed a bug with the transformations between ~sunpy.coordinates.frames.Heliocentric and ~sunpy.coordinates.frames.HeliographicStonyhurst when the frame observation time was not the same as the observer observation time. The most common way to encounter this bug was when transforming from ~sunpy.coordinates.frames.Helioprojective to any non-observer-based frame while also changing the observation time. * Fixed a sunpy.coordinates bug where a frame using the default observer of Earth could have its observer overwritten during a transformation. * VSO client fetch should not download when wait keyword argument is specified. * Fixed a bug with ~sunpy.coordinates.wcs_utils.solar_frame_to_wcs_mapping that assumed that the supplied frame was a SunPy frame. * Fixed bugs with ~sunpy.coordinates.wcs_utils.solar_frame_to_wcs_mapping if the input frame does not include an observation time or an observer. + Improved Documentation * Added more details to docstrings in sunpy.coordinates.frames. * Added a link to package maintainer list in the API Stability page. + Trivial/Internal Changes * Allow running our sphinx-gallery examples as Jupyter notebooks via Binder ------------------------------------------------------------------- Tue Jul 23 15:30:32 UTC 2019 - Todd R <toddrme2178@gmail.com> - Update to Sunpy 1.0.2 + Backwards Incompatible Changes * Move the matplotlib animators from ``sunpy.visualisation.imageanimator`` and ``sunpy.visualization.mapcubeanimator`` to `sunpy.visualization.animator`. * Make `sunpy.time.parse_time` return `astropy.time.Time` instead of `datetime.datetime`. * The properties and methods of `sunpy.time.TimeRange` returns `astropy.time.Time` and `astropy.time.TimeDelta` instead of `datetime.datetime` and `datetime.timedelta` respectively. * The `sunpy.instr.goes` module now accepts and returns `sunpy.timeseries.XRSTimeSeries` objects only. * ``obstime`` keyword param of ``sunpy.instr.goes._goes_lx`` takes a non-scalar `astropy.time.Time` object instead of `numpy.ndarray`. The precision of times contained in `sunpy.timeseries` has been increased to 9 from 6. * Removed ``sunpy.net.jsoc.attrs.Time`` because it served the same purpose as `sunpy.net.attrs.Time` after the switch to `astropy.time.Time`. * Remove unused ``**kwargs`` within TimeSeries functions. * Rotation matrices inside map objects were previously stored as numpy matrices, but are now stored as numpy arrays, as numpy will eventually remove their matrix datatype. See https://docs.scipy.org/doc/numpy/user/numpy-for-matlab-users.html for more information. * The `sunpy.cm.show_colormaps` function now accepts the keyword 'search' instead of 'filter'. * The keyword arguments to all client ``.fetch`` methods have been changed to support the new parfive downloader and to ensure consisteny across all Fido clients. * The Helioviewer client has been switched to using the newer Helioviewer API. This has meant that we have changed some of the keywords that were passed into client's methods. We have enforced that several keywords (observatory,instrument,detector,measurement) need to be defined otherwise the functions cannot return any data. * Maps no longer assume that the pixel units are arcseconds if the units aren't explicitly set. In addition to this if critical metadata is missing from when creating a map, the map will fail to initialize and will raise an error. * axis_ranges kwarg of `sunpy.visualization.animator.base.ArrayAnimator`, `sunpy.visualization.animator.image.ImageAnimator` and `sunpy.visualization.animator.line.LineAnimator` now must be entered as None, [min, max] or pixel edges of each array element. Previously, pixel centers were expected. This change removes ambiguity in interpretation and ensures the extent of the plot can always be accurately derived. * All keywords have been added (with defaults) to each `~sunpy.net.helioviewer.HelioviewerClient` function. This means that there will be some changes to the style of the PNG screenshot that is returned. Returns for the JPEG 2000 and the other functions should be the same but not guaranteed. * Changed `sunpy.sun.models.interior` and `sunpy.sun.models.evolution` from `pandas.DataFrame` to `astropy.table.QTable` * Minimum numpy version is now >=1.14.5 * Removed ``sunpy.time.julian_day``, ``sunpy.time.julian_centuries``, ``sunpy.time.day_of_year``, ``sunpy.time.break_time``, ``sunpy.time.get_day``. * Updated the solar values in `sunpy.sun.constants` to IAU 2015 values. * Renamed `eccentricity_sunearth_orbit` to `eccentricity_sun_earth_orbit`. * Renamed ``sunpy.image.rescale`` to `sunpy.image.resample`. * Remove the ``basic_plot`` keyword argument from `~sunpy.map.Map.GenericMap.peek`. An example has been added to the gallery showing how to make a plot like this. * `sunpy.map.GenericMap` will no longer use the key `solar_b0` as a value for heliographic latitude. * `sunpy.map.GenericMap` now checks for a complete observer location rather than individually defaulting coordinates (lat, lon, distance) to Earth position. If any one of the three coordinates is missing from the header the observer will be defaulted to Earth and a warning raised. * `sunpy.sun.sun` functions have been re-implemented using Astropy for significantly improved accuracy. Some functions have been removed. * All of the functions in `sunpy.sun.sun` and all of the Sun-specific functions in `sunpy.coordinates.ephemeris` have been moved to the new module `sunpy.coordinates.sun`. + Deprecations and Removals * The deprecated ``sunpy.lightcurve``, ``sunpy.wcs`` and ``sunpy.spectra`` modules have now been removed. * ``sunpy.instr.rhessi.get_obssumm_dbase_file`` ``sunpy.instr.rhessi.get_obssum_filename``, ``sunpy.instr.rhessi.get_obssumm_file`` have been removed. `Fido <sunpy.net.fido_factory.UnifiedDownloader>` should be used to download these files. * Removed ``heliographic_solar_center`` in favour of `~sunpy.coordinates.ephemeris.get_sun_L0` and `~sunpy.coordinates.ephemeris.get_sun_B0` * Removed ``GenericClient.query`` in favour of `sunpy.net.dataretriever.GenericClient.search` * Removed ``sunearth_distance`` in favour of ``get_sunearth_distance`` * Removed ``remove_lytaf_events_from_lightcurve`` in favour of `sunpy.instr.lyra.remove_lytaf_events_from_timeseries` * Removed ``sunpy.cm.get_cmap`` in favour of ``plt.get_cmap`` * Removed ``database.query`` in favour of `sunpy.database.Database.search` * Removed ``sunpy.net.vso.InteractiveVSOClient`` * Removed ``MapCube`` in favour of `~sunpy.map.MapSequence` * Removed ``solar_north`` in favour of ``get_sun_P`` * Removed ``database.download`` in favour of `sunpy.database.Database.fetch` * Removed ``sunpy.map.GenericMap.pixel_to_data`` in favour of `sunpy.map.GenericMap.pixel_to_world` * Removed ``GenericClient.get`` in favour of `sunpy.net.dataretriever.GenericClient.fetch`. This changes applies to the other clients as well. * Removed `Map.xrange` and `Map.yrange` * Removed ``sunpy.net.attrs.Wave`` in favour of `a.Wavelength <~sunpy.net.vso.attrs.Wavelength>` * Removed ``JSOCClient.check_request`` in favour of `drms.ExportRequest.status` * `sunpy.net.vso.VSOClient.query_legacy` and `sunpy.net.vso.VSOClient.latest` have been deprecated as we strongly recommend people use `sunpy.net.Fido` for all queries. * The deprecated ``sunpy.physics.transforms`` module has been removed, it is replaced by `sunpy.physics.solar_rotation` and `sunpy.physics.differential_rotation`. * Removed `~sunpy.sun.sun.solar_cycle_number` because it was fundamentally flawed + Features * Change arguments to `sunpy.test` from ``offline=`` and ``online=`` to ``online`` and ``online_only``. This matches the behavior of the figure keyword arguments and comes as a part of a move to using a modified version of the Astropy test runner. * asdf schemas and tags were added for the SunPy coordinate frames and `~sunpy.map.GenericMap` allowing these objects to be saved to and restored from `asdf <https://asdf.readthedocs.io/>`__ files. * The images from image tests are now saved in a local folder for easy access. * ``sunpy.map.MapCube`` has been renamed to `sunpy.map.MapSequence` to better reflect its use as a collection of map objects. * Net search attributes now support tab completion of values and display a table of possible values when printed, to allow easier discoverability of possible search values. * Running the figure tests now creates a page showing the differences between the expected figures and the figures produced from running the tests. * Add support for Dask arrays in `sunpy.map.Map`. The map factory now checks a whitelist of array types rather than strictly checking if the array is of type `numpy.ndarray`. * Persist the name of a coordinate, i.e. "earth" even though a concrete coordinate object has been calculated and use this string representation to change the way the sunpy frames are printed. This is primarily to facilitate displaying the name of the body rather than the concrete coordinate when printing a `~astropy.coordinates.SkyCoord`. * `~sunpy.net.hek.HEKClient.search` now returns an `astropy.table.Table` instead of list of a `dict`. * Add a downscaled HMI image to the sample data. * Now able to create a `sunpy.map.Map` using an array and a `astropy.wcs.WCS` object. * The download manager for `Fido.fetch <sunpy.net.fido_factory.UnifiedDownloader.fetch>` has been replaced with `parfive <https://parfive.readthedocs.io/en/latest/>`__. This provides advanced progress bars, proper handling of overwriting and the ability to retry failed downloads. * `sunpy.map.GenericMap` can now save out rice compressed FITS files. * Now any SunPyDeprecationWarnings will cause an error when using pytest. * Added full Tox support for SunPy tests, documentation build and figure tests. * Transition the `sunpy.net.vso.VSOClient` from using suds to `zeep <https://python-zeep.readthedocs.io/en/master/>`__ as the SOAP library. This is a more actively maintained library, and should provide better support for the VSOs https endpoints. This change should have no effect on the public API of the `sunpy.net.vso.VSOClient`. * Provided access to the Helioviewer header information using `~sunpy.net.helioviewer.HelioviewerClient.get_jp2_header` function. * Add a new WSDL URL and port to support SunPy use of VSO instance at SDAC. * Add support for COSMO K-Coronograph (KCOR) FITS data. * Add logger messaging system based on `~astropy.logger.AstropyLogger`, cleaned up all warnings, removed all print statements. * The function `sunpy.image.coalignment.get_correlation_shifts` now issues an error when the number of dimensions are not correct instead of a warning and returning None. * The default location of the sunpy sample data has changed to be in the platform specific data directory as provided by `appdirs <https://github.com/ActiveState/appdirs>`__. * Add timeseries support for EVE/ESP level 1 data in `sunpy.timeseries.sources.eve` * The default style for Map plots have changed to reflect the changes in Astropy 3.2. * `sunpy.coordinates.ephemeris.get_body_heliographic_stonyhurst` can now account for light travel time when computing the (apparent) body position, as long as the observer location is provided. * Added a helper function (`sunpy.map.make_fitswcs_header`) that allows users to create a meta header for custom created `sunpy.map.GenericMap`. * Map plotting now accepts the optional keyword `clip_interval` for specifying a percentile interval for clipping. For example, if the interval (5%, 99%) is specified, the bounds of the z axis are chosen such that the lowest 5% of pixels and the highest 1% of pixels are excluded. * The new function `~sunpy.coordinates.get_horizons_coord` enables querying JPL HORIZONS for the locations of a wide range of solar-system bodies, including spacecraft. + Bug Fixes * Fix the bug that prevented VSO queries for HMI data from downloading file without specifying ``a.Physobs``. * Fix `sunpy.map.mapcube.MapCube.plot`. The code had not been updated to support the changes to the wcsaxes helper functions. * Replace all use of the deprecated ``sunpy.cm.get_cmap`` with `matplotlib.pyplot.get_cmap` to prevent deprecation warnings being raised. * Fix generation of the coordinate transformation graph with Astropy 3.1.dev * Prevent helioviewer from erroring when downloading file to a directory that does not exist. It will now create the directory when required. * Fix transformations into/out of Heliographic Stonyhurst frame when the coordinate representation is Cartesian. * Running the figure tests with ``setup.py test`` now saves the figures and the hashes to the same directory as setup.py. * `sunpy.instr.fermi.met_to_utc` now returns the correct utc time which takes into account the leap seconds that have passed. * Support passing Python file objects to `sunpy.io.fits.write`. * Added DRMS to setup.py so sunpy[all] installs it as a dependancy. * Fix eve 0cs timeseries seperator regex to support Python 3.7 * Fix the bug which crashes `~sunpy.map.sources.LASCOMap` for when 'date-obs' is reformatted agian from a self applied function. * Change all instances of quantity_allclose to `astropy.units.allclose` this prevents pytest being needed to import `sunpy.coordinates` on Astropy 3 * Fix RHESSI obssum file downloading to include the final day in the time range. * Raise an error when transforming between HPC and HCC frames if the observer is not the same. * Replaces the existing LASCO C2 and C3 color maps with new ones that perform better with JP2 and Level 0.5, 1 data. * Do not attempt to save a FITS header comment for a keyword which is not in the header. This prevents an error on saving some maps after the metadata had been modified but not the comments. * Add support for `~sunpy.map.sources.HMIMap` objects as input to `sunpy.instr.aia.aiaprep`. * User can convert between HPC and HCC coordinates with different observers. This is implemented by automatically transforming the coordinate into HGS and then changing observer, and then transforming back to HCC. * Changed default file type for Helioviewer to prevent decode errors. * Increase figure size to avoid cutting off longer colormap names in `sunpy.cm.show_colormaps`. * The sample data directory will no longer be created until files are downloaded to it. * Timeseries and lightcurve will now respect updated config values for download directory. * Always use _default_wrap_angle rather than hard coding a wrap angle in the init of a sunpy coordinate frame * Ensure imageanimators only slice arrays with integers * Fixed `sunpy.io.fits.write` to handle the keyword ``COMMENT`` correctly. * If Carrington longitude ("crln_obs") is found in the FITS header, `~sunpy.map.Map` converts this to the correct Heliographic longitude. * `sunpy.net.helio.hec.HECClient.time_query` now resolves the correct input time format. * Fixes the calculation of the solar rotation of coordinates and the differential rotation of `sunpy.map.GenericMap`. * Added back the FERMI GBM client to `sunpy.net.dataretriever.sources`. * Fix bug in `sunpy.net.hek` which raised and error if a search returned zero results, now returns an empty `sunpy.net.hek.HEKTable`. * `~sunpy.map.sources.AIAMap` now uses the provided HAE coordinates instead of the provided HGS coordinates to determine the observer location. * Correctly zero pad milliseconds in the `sunpy.util.scraper.Scraper` formatting to prevent errors when the millisecond value was less than 100. * Fix `sunpy.util.scraper.Scraper` failing if a directory is not found on a remote server. * Correctly extract observer location from MDI and EIT data * Fix HGS <> HCRS test due to Ecliptic frame changes in astropy 3.2 * Fixes bug when creating a timeseries from a URL and bug when creating a TimeSeries from older GOES/XRS fits files. * Added `~sunpy.map.EUVIMap.rsun_obs`. It returns a quantity in arcsec consistent with other `sunpy.map.GenericMap` and overwrites mapbase's assumption of a photospheric limb as seen from Earth. * Fixed bugs related to using `~sunpy.map.GenericMap.plot` and `~sunpy.map.GenericMap.peek` with the ``inline`` Matplotlib backend in Jupyter notebook. * Make a correction to `sunpy.coordinates.wcs_utils.solar_wcs_frame_mapping` so that `astropy.wcs.WCS` objects are correctly converted to `sunpy.coordinates.frames` objects irrespective of the ordering of the axes. * The `solar_rotate_coordinate` function returns a coordinate that accounts for the location of the new observer. * Add support for rotation parameters to `sunpy.map.make_fitswcs_header`. * Improve the implementation of `~sunpy.physics.differential_rotation.differential_rotate` the image warping when transforming Maps for differential rotation and change in observer position. * Fix a bug where new helioviewer sources potentially cause `~sunpy.net.helioviewer.HelioviewerClient.data_sources` to error. + Improved Documentation * Organise the gallery into sections based on example type and tidy up a little. * Added gallery example showing the conversion of Helioprojective Coordinates to Altitude/Azimuth Coordinates to and back. * Add contribution guidelines for the sunpy example gallery. * Added a gallery example for "Downloading and plotting a HMI image" and "Creating a Composite map". * Added an example for `~sunpy.visualization.animator.ImageAnimatorWCS`. * Minor changes to the developer guide regarding sprint labels. * Copyedited and corrected the solar cycles example. * Changed "online" mark to "remote_data" and made formatting of marks consistent. * Add a missing plot to the end of the units and coordinates guide. * Added gallery example showing how to access the SunPy colormaps * Added gallery example showing how to access the SunPy solar physics constants. * Major clean up of the developer documentation. * Overhaul of the install intructions for the guide section of our documentation. + Trivial/Internal Changes * `~sunpy.time.parse_time` now uses `singledispatch` underneath. * Revert the handling of ``quantity_allclose`` now that `astropy/astropy#7252 <https://github.com/astropy/astropy/pull/7252>`__ is merged. This also bumps the minimum astropy version to 3.0.2. * Replace the subclasses of matplotlib Slider and Button in `sunpy.visualization` with partial functions. * Sort the ana C source files before building to enable reproducible builds. * We are now using `towncrier <https://github.com/hawkowl/towncrier>`__ to generate our changelogs. * Moved figure tests to Python 3.6. * Removed old metaclass used for Map and TimeSeries as we have now moved to Python 3.6. * Updated astropy_helpers to v3.0.2. * When running image tests, a comparison HTML page is now generated to show the generated images and expected images. * Change to using pytest-cov for coverage report generation to enable support for parallel builds * Use of `textwrap` to keep source code indented when multiline texts is used * Fix mispelling of private attribute ``_default_heliographic_latitude`` in map. * Miscellaneous fixes to developer docs about building sunpy's documentation. * Changed `sunpy.instr.aia.aiaprep` to update BITPIX keyword to reflect the float64 dtype. * Remove warning from ``GenericMap.submap`` when using pixel ``Quantities`` as input. * Remove the usage of six and all ``__future__`` imports * Fix SunPy Coordinate tests with Astropy 3.1 * Stores entries from directories into database sorted by name. It adds mocks to the database user guide examples. * Fix all DeprecationWarning: invalid escape sequence. * Used `unittest.mock` for creating offline tests for simulating online tests for `test_noaa.py` * Fix support for pip 19 and isolated builds * Moved to using `AppDirs <https://github.com/ActiveState/appdirs>`__ as the place to host our configuration file. * Users can now use fewer keywords in our `~sunpy.net.HelioviewerClient` to access the available sources. Either by `observatory` and `measurement` or `instrument` and `measurement` as this much information is enough to get the source ID for most of the cases. * Remove the pytest dependancy on the ``GenericMap`` asdf tag. * Fix initialization of `~sunpy.net.vso.VSOClient` when no WSDL link is found. ------------------------------------------------------------------- Fri Jan 4 17:31:38 UTC 2019 - Todd R <toddrme2178@gmail.com> - Update to version 0.9.5 + New Features * Added TimeUTime class to support utime. [#2409] * Example for fine-grained use of ticks and grids [#2435] * Maintiners Workflow Guide [#2411] * Decorator to append and/or prepend doc strings [#2386] * Adding `python setup.py test --figure-only` [#2557] * Fido.fetch now accepts pathlib.Path objects for path attribute.[#2559] * The `~sunpy.coordinates.HeliographicStonyhurst` coordinate system can now be specified using a cartesian system, which is sometimes known as the "Heliocentric Earth equatorial" (HEEQ) coordinate system. [#2437] + API Changes * `sunpy.coordinates.representation` has been removed. Longitude wrapping is now done in the constructor of the frames. [#2431] * Propagation of ``obstime`` in the coordinate frame transformation has changed, this means in general when transforming directly between frames (not `~astropy.coordinates.SkyCoord`) you will have to specify ``obstime`` in more places. [#2461] * Transforming between Heliographic Stonyhurst and Carrington now requires that ``obstime`` be defined and the same on both the input and output frames. [#2461] * Removed the figure return from .peek() [#2487] + Bug Fixes * Improve TimeSeriesBase docstring [#2399] * Validate that pytest-doctestplus is installed [#2388] * Fix use of self.wcs in plot in mapbase [#2398] * Updated docstring with pointer to access EVE data for other levels [#2402] * Fix broken links and redirections in documentation [#2403] * Fixes Documentation changes due to NumPy 1.14 [#2404] * Added docstrings to functions in dowload.py [#2415] * Clean up database doc [#2414] * rhessi.py now uses sunpy.io instead of astropy.io [#2416] * Remove Gamma usage in Map [#2424] * Changed requirements to python-dateutil [#2426] * Clarify coordinate system definitions [#2429] * Improve Map Peek when using draw_grid [#2442] * Add HCC --> HGS test [#2443] * Testing the transformation linking SunPy and Astropy against published values [#2454] * Fixed title bug in sunpy.timeseries.rhessi [#2477] * Allow LineAnimator to accept a varying x-axis [#2491] * Indexing Bug Fix to LineAnimator [#2560] * Output sphinx warnings to stdout [#2553] * Docstring improvement for LineAnimator [#2514] * move the egg_info builds to circleci [#2512] * Added tests for TraceMap [#2504] * Fix HGS frame constructor and HPC ``calculate_distance`` with SkyCoord constructor. [#2463] * removed `wavelnth` keyword in meta desc of Maps to avoid using non standard FITS keyword like `nan` [#2456] * The documentation build now uses the Sphinx configuration from sphinx-astropy rather than from astropy-helpers.[#2494] * Migrate to hypothesis.strategies.datetimes [#2368] * Prevent a deprecation warning due to truth values of Quantity [#2358] * Print a warning when heliographic longitude is set to it's default value of 0 [#2480] * parse_time now parses numpy.datetime64 correctly. [#2572] ------------------------------------------------------------------- Mon Feb 26 18:40:37 UTC 2018 - toddrme2178@gmail.com - Update to version 0.8.4 + Bug Fixes * Improve detection of ``SkyCoord`` frame instantiation when distance is `1*u.one`. This fixes a plotting bug with ``WCSAxes`` in Astropy 3.0 [#2465] * removed `wavelnth` keyword in meta desc of Maps to avoid using non standard FITS keyword like `nan` [#2427] * Change the default units for HPC distance from `u.km` to `None`. [#2465] - Update to version 0.8.3 + Bug Fixes * `~sunpy.net.dataretriever.clients.XRSClient` now reports time ranges of files correctly. [#2364] * Make parse_time work with datetime64s and pandas series [#2370] * CompositeMap axes scaling now uses map spatial units [#2310] * Moved license file to root of repository and updated README file [#2326] * Fix docstring formatting for net.vso.attrs [#2309]] * Fix coloring of ticks under matplotlib 2.0 default style [#2320] * Always index arrays with tuples in `ImageAnimator` [#2320] * Added links to possible attrs for FIDO in guide [#2317] [#2289] * Updated GitHub Readme [#2281] [#2283] * Fix matplotlib / pandas 0.21 bug in examples [#2336] * Fixes the off limb enhancement example [#2329] * Changes to masking hot pixels and picking bright pixels examples [#2325] [#2319] * Travis CI fix for numpy-dev build [#2340] * Updated masking brightest pixel example [#2338] * Changed TRAVIS cronjobs [#2338] * Support array values for `obstime` for coordinates and transformations [#2342] [#2346] * Updated Gallery off limb enhance example [#2337] * Documentation fixes for VSO [#2354] [#2353] * All tests within the documentation have been fixed [#2343] * Change to using pytest-remotedata for our online tests [#2345] * Fixed upstream astropy/numpy documentation issues [#2359] * Documentation for Map improved [#2361] * Fix the output units of pixel_to_world [#2362] * Documentation for Database improved [#2355] * Added test for mapsave [#2365] * Documentation for Sun improved [#2369] ------------------------------------------------------------------- Thu Jun 22 14:57:35 UTC 2017 - alarrosa@suse.com - Initial release of python-sunpy 0.7.8
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