Revisions of python-yt

Dirk Mueller's avatar Dirk Mueller (dirkmueller) committed (revision 31)
- update to yt-4.4.0:
  * the frontend previously known as boxlib was renamed to AMReX
  * this release contains a brand new frontend for Parthenon
    datasets.
  * off-axis projections are now supported
  * improved convergence with grid resolution
  * improved mass conservation
  * fixed a critical bug where column densities estimates were
    incorrect by a factor x3
    calculation for Ramses, by @cphyc
  * Change in the way cooling tables are used. If "self-
    shielding" is detected from the namelist or is set by the
    user with `ds=yt.load("output_12345", self_shielding=True)`,
    the hydrogen number density used to obtain cooling, heating
    and $$\mu$$ from the cooling tables are multiplied by an
    exponential prefactor, consistently with what RAMSES is doing
    internally. This will change the values of the cooling and
    heating rates, as well as $$\mu$$ and temperature at high-
    densities (above 0.01 mp/cm³).
- Restrict numpy to < 2 for now.
buildservice-autocommit accepted request 1188820 from Matej Cepl's avatar Matej Cepl (mcepl) (revision 30)
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Matej Cepl's avatar Matej Cepl (mcepl) accepted request 1188718 from Benjamin Greiner's avatar Benjamin Greiner (bnavigator) (revision 29)
- Revert restriction. Numpy 2 is supported since 4.3.1
buildservice-autocommit accepted request 1188090 from Steve Kowalik's avatar Steve Kowalik (StevenK) (revision 28)
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Steve Kowalik's avatar Steve Kowalik (StevenK) committed (revision 27)
- Restrict numpy to < 2 for now.
buildservice-autocommit accepted request 1186758 from Factory Maintainer's avatar Factory Maintainer (factory-maintainer) (revision 26)
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Steve Kowalik's avatar Steve Kowalik (StevenK) committed (revision 25)
- Update to 4.3.1:
  * Fix broken urllib imports
  * Make annotate_sphere and annotate_arrow safe when run after plot
    invalidation
  * Fix an incompatibility with unyt 3.0 (amu_cgs doesn't exist as a physical
    constant anymore)
  * Handle deprecation warnings from numpy 2.0.0dev0 (np.row_stack ->
    np.vstack and np.in1d -> np.isin)
  * Avoid a deprecation warning in yt.load_sample on Python 3.12
  * Switch to field tuples for default fields in particle_trajectories
  * Enforce Figure dpi in _show_mpl
  * Fix bug where race condition results in incorrect fields categorization
    when computing particle_trajectories
  * Use the validated center for YTCuttingPlane set_field_parameter
  * Avoid usage of deprecated numpy.core namespace (numpy 2 compat)
  * Fix geographic coordinate conversions
  * Update xarray integration test to use non-deprecated API
  * Enzo testing framework - ignore units for ShockTube tests
  * Explicitly set minimum Python to 3.9.2
  * Ditch np.int_t, removed in numpy 2's C API (use np.int64_t instead)
  * Migrate module-level setup/teardown functions to pytest
- Drop patch yt-pr4727-unpin-unyt.patch, included upstream.
- Remove upper bound on numpy.
buildservice-autocommit accepted request 1166141 from Dirk Mueller's avatar Dirk Mueller (dirkmueller) (revision 24)
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Dirk Mueller's avatar Dirk Mueller (dirkmueller) committed (revision 23)
- add sle15_python_module_pythons
  * The angular momentum has been reversed compared to previous versions of yt.
  * New frontend support for the code AMRVAC. Many thanks to Clement Robert
  * Support for the AdaptaHOP halo finder code
  * yt now supports geographic transforms and projections of data with
  * annotations used to work for only a single point, they now work for multiple points
  * cosmology calculations now have support for the relativistic energy density of the
    universe, see `PR 1714 <https://github.com/yt*project/yt/pull/1714>`__.
    This feature is accessible to cosmology datasets and was added to the Enzo frontend.
  * the eps writer now allows for arrow rotation. this is accessible with
    the ``rotate`` kwarg in the ``arrow`` function.
  * allow for dynamic load balancing with parallel loading of timeseries
  * show/hide colorbar and show/hide axes are now available for
    ``ProfilePlot`` s. These functions were also moved from the PlotWindow to the
  * add support for ipywidgets with an ``__ipython_display__`` method on the
    FieldTypeContainer. Field variables, source, and the field array can be
    viewed with this widget. See PRs `PR 1844 <https://github.com/yt*project/yt/pull/1844>`__
    and `PR 1848 <https://github.com/yt*project/yt/pull/1848>`__,
  * cut regions can now be made with ``exclude_`` and ``include_`` on a number of objects,
    including above and below values, inside or outside regions, equal values, or nans.
    See `PR 1964 <https://github.com/yt*project/yt/pull/1964>`__ and supporting
  * previously aliased fluid vector fields in curvilinear geometries were not
    converted to curvilinear coordinates, this was addressed in
  * 2d polar and 3d cylindrical geometries now support annotate_quivers,
    streamlines, line integral convolutions, see
  * gradient fields are now supported in curvilinear geometries. See
  * plotwindow colorbars now utilize mathtext in their labels,
  * raise deprecation warning when using ``mylog.warn``. Instead use
  * extend support of the ``marker``, ``text``, ``line`` and ``sphere`` annotation
  * Export data container and profile fields to AstroPy QTables and
buildservice-autocommit accepted request 1157041 from Matej Cepl's avatar Matej Cepl (mcepl) (revision 22)
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Matej Cepl's avatar Matej Cepl (mcepl) accepted request 1156425 from Benjamin Greiner's avatar Benjamin Greiner (bnavigator) (revision 21)
- Skip python39: no longer supported since ipython 8.19
buildservice-autocommit accepted request 1147119 from Matej Cepl's avatar Matej Cepl (mcepl) (revision 20)
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Matej Cepl's avatar Matej Cepl (mcepl) accepted request 1146886 from Benjamin Greiner's avatar Benjamin Greiner (bnavigator) (revision 19)
  * This is the first version with support to CPython 3.12.
  * We've resolved all remaining compatibility issues with Cython
    3.
  ## New features
  * #4449 Add support for symlog colorbars with arbitrary bases, by
    @neutrinoceros (issue #4448)
  * #4455 Add support for passing field keys for colors and
    linewidth in streamline plot annotations, by @neutrinoceros
    (issue #4454)
  * #4527 Add QuadrilinearFieldInterpolator, by @brittonsmith
  * #4553 Store basic software info in png metadata, by @Xarthisius
  * #4556 Add option to include min/max limits on the color field
    for export_sketchfab, by @evenoconnor
  * #4658 Allow annotate_grids to force cmap to respect max_levels,
    by @zingale
  * #4642 + #4662 Make unused pixels actually transparent in all
    imshow-based 2D visualisations, by @neutrinoceros (issue #4639
    by @vdbma)
  * #4481 Add the ability to set the transfer function label
    fontsize, by @zingale
  ##  Frontends
  * #4562 Athena++ stretched grids support, by @jzuhone (issues
    #1585 by @Yurlungur, #3389 by @smressle, #3619 by
    @neutrinoceros and #4557 by @matthewturk)
  * #4572 Species handling for the stream frontend, by @jzuhone
  * #4470 + #4605 Update GIZMO frontend to handle newer GIZMO
    versions, by @mtryan83
  * #4424 Support for sinks in csv format for RAMSES frontend, by
    @Lenoble-lab
- Release 4.2.x
Matej Cepl's avatar Matej Cepl (mcepl) accepted request 1146798 from Benjamin Greiner's avatar Benjamin Greiner (bnavigator) (revision 18)
- Update to 4.3.0
- Add yt-pr4727-unpin-unyt.patch gh#yt-project/yt#4727
- Enalbe multibuild test flavor
- Add yt-ignore-pytestdepr.patch
buildservice-autocommit accepted request 1115044 from Ondřej Súkup's avatar Ondřej Súkup (mimi_vx) (revision 17)
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Ondřej Súkup's avatar Ondřej Súkup (mimi_vx) committed (revision 16)
Ondřej Súkup's avatar Ondřej Súkup (mimi_vx) committed (revision 15)
buildservice-autocommit accepted request 1064246 from Dirk Mueller's avatar Dirk Mueller (dirkmueller) (revision 14)
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Dirk Mueller's avatar Dirk Mueller (dirkmueller) committed (revision 13)
- update to 4.1.4:
  * Fix calling PlotContainer.set_font to set font color,
  * Fix a regression in yt.load where '$HOME' and '~' path
    weren't expanded
  * (partial) Fix issue #4286 SDF frontend breaks load() if
    target file lacks read permission
  * (FLASH) Fix domain edges padding in reduced dimensions
  * (partial) Delay expensive imports
  * Cleanup calls to private methods _setup_plots in
    cookbook
buildservice-autocommit accepted request 1046208 from Matej Cepl's avatar Matej Cepl (mcepl) (revision 12)
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