Whole Slide Imaging for Orthanc
The Orthanc project provides three official tools to support DICOM for whole-slide microscopic imaging (WSI):
- A so-called “DICOM-izer” command-line tool that converts whole-slide images to DICOM series, following Supplement 145.
- A plugin that extends Orthanc with a Web viewer of whole-slide images for digital pathology.
- Another command-line tool that converts a DICOM series stored inside Orthanc, to a standard hierarchical TIFF image.
- Developed at graphics
- Sources inherited from project openSUSE:Factory
-
4
derived packages
- Download package
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osc -A https://api.opensuse.org checkout openSUSE:Backports:SLE-15-SP4:FactoryCandidates/orthanc-wsi && cd $_ - Create Badge
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Source Files
| Filename | Size | Changed |
|---|---|---|
| OrthancWSI-2.1.tar.gz | 0000212688 208 KB | |
| _service | 0000000077 77 Bytes | |
| openlayers-3.19.0-dist.zip | 0000553852 541 KB | |
| orthanc-wsi-readme.SUSE | 0000000876 876 Bytes | |
| orthanc-wsi.changes | 0000003631 3.55 KB | |
| orthanc-wsi.spec | 0000004945 4.83 KB |
Latest Revision
Ana Guerrero (anag+factory)
accepted
request 1208950
from
Axel Braun (DocB)
(revision 10)
- Version 2.1
* Support of sparse encoding of tiles in OpenSlide (notably for MIRAX format)
* OrthancWSIDicomizer supports plain TIFF, besides hierarchical TIFF
* New option: "--force-openslide" to force the use of OpenSlide on TIFF-like files
* New option: "--padding" to control deep zoom of plain PNG/JPEG/TIFF images over IIIF
* Added support for DICOM tag "Recommended Absent Pixel CIELab" (0048,0015)
* Force version of Mirador to 3.3.0
* In the IIIF manifest, reverse the order of the "sizes" field, which
seems to fix compatibility with Mirador v4.0.0-alpha
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