Overview

Request 803427 accepted

- Fix line warp.
- Update to 2.0.1
* Bug fixes Bio::GFF::GFF2::Record.parse did not return correct
object.
* Add script sample color_scheme_aa.rb: Example of
Bio::ColorScheme for an amino acid sequence.
* Add script sample fastq2html.rb: Visualization of FASTQ
sequences, colored by quality scores.
* Add script sample rev_comp.rb: Shows reverse-complement
sequences of the given sequences.
* Fix script na2aa.rb: Completely rewritten to fix bug. Shows
translated sequences.
* Added support for various sequence formats in
color_scheme_na.rb:
* CWL (Common Workflow Language) workflow files are added for
some sample scripts.
* CWL files sample script added: fastq2html.rb: fastq2html.cwl
with fastq2html.testdata.yaml
* CWL files sample script added: na2aa.rb: na2aa.cwl with
na2aa.testdata.yaml
* CWL files sample script added: rev_comp.rb: rev_comp.cwl with
rev_comp.testdata.yaml
- Fix build for Tumbleweend

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Request History
andy great's avatar

andythe_great created request

- Fix line warp.
- Update to 2.0.1
* Bug fixes Bio::GFF::GFF2::Record.parse did not return correct
object.
* Add script sample color_scheme_aa.rb: Example of
Bio::ColorScheme for an amino acid sequence.
* Add script sample fastq2html.rb: Visualization of FASTQ
sequences, colored by quality scores.
* Add script sample rev_comp.rb: Shows reverse-complement
sequences of the given sequences.
* Fix script na2aa.rb: Completely rewritten to fix bug. Shows
translated sequences.
* Added support for various sequence formats in
color_scheme_na.rb:
* CWL (Common Workflow Language) workflow files are added for
some sample scripts.
* CWL files sample script added: fastq2html.rb: fastq2html.cwl
with fastq2html.testdata.yaml
* CWL files sample script added: na2aa.rb: na2aa.cwl with
na2aa.testdata.yaml
* CWL files sample script added: rev_comp.rb: rev_comp.cwl with
rev_comp.testdata.yaml
- Fix build for Tumbleweend


Lars Vogdt's avatar

lrupp accepted request

ok

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